Job Description P17952 Confidence 96.58% Date Thu Jan 5 11:36:25 GMT 2012 Rank 158 Aligned Residues 91 % Identity 23% Template c3u62A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima Resolution 1.45 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																											.																																																.	.	.	.	.	.	.
Query SS confidence																											.																																																.	.	.	.	.	.	.
Query Sequence		R	H	I	H	F	V	G	I	G	G	A	G	M	G	G	I	A	E	V	L	A	N	E	G	Y	.	Q	I	S	G	S	D	L	A	P	N	P	V	T	Q	Q	L	M	N	L	G	A	T	I	Y	F	N	H	R	P	E	N	V	R	D	A	S	V	V	V	V	S	S	A	I	S	A	D	.	.	.	.	.	.	.
Query Conservation																											.																																																.	.	.	.	.	.	.
Alig confidence																	.										.										.																																						.	.	.	.	.	.	.
Template Conservation																	.																				.
Template Sequence		E	P	V	V	V	V	G	A	G	G	A	A	R	A	V	.	I	Y	A	L	L	Q	M	G	V	K	D	I	W	V	V	N	R	T	I	.	E	R	A	K	A	L	D	F	P	V	K	I	F	S	L	D	Q	L	D	E	V	V	K	K	A	K	S	L	F	N	T	T	S	V	G	M	K	G	E	E	L	P	V	S
Template Known Secondary structure		S	S							S							.							T	T									S			.					T			S	S						G	G	G							T		S						S	S	T	T	T	T	S				S
Template Predicted Secondary structure																	.																				.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
																			92	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	E	I	V	A	A	H	E	A	R	I	P	.	V	I	R	R	A	E	M	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		D	D	S	L	K	N	L	S	L	V	Y	D	V	I	Y	F	D	T	P	L	V	V	K	A	R	K	L	G	V	K	H	I	I	K	G	N	L	M	F
Template Known Secondary structure						T	T		S						S	S	S												T		S					T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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