Job Description P17952 Confidence 96.71% Date Thu Jan 5 11:36:25 GMT 2012 Rank 147 Aligned Residues 125 % Identity 16% Template c3pqeD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:l-lactate dehydrogenase; PDBTitle: crystal structure of l-lactate dehydrogenase from bacillus subtilis2 with h171c mutation Resolution 2.20 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.										.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																													.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		R	V	R	H	I	H	F	V	G	I	G	G	A	G	M	G	G	I	A	E	V	L	A	N	E	G	Y	.	.	Q	I	S	G	S	D	L	A	P	N	P	V	T	Q	Q	L	M	N	L	.	.	.	.	.	.	.	.	.	G	A	T	I	Y	F	N	H	R	P	E	N	V	R	D	A	S	V	V	V	V	S	S
Query Conservation																													.	.																				.	.	.	.	.	.	.	.	.
Alig confidence																	.												.	.																				.	.	.	.	.	.	.	.	.						.
Template Conservation																	.																																															.
Template Sequence		H	V	N	K	V	A	L	I	G	A	G	F	V	G	S	.	S	Y	A	F	A	L	I	N	Q	G	I	T	D	E	L	V	V	I	D	V	N	K	E	K	A	M	G	D	V	M	D	L	N	H	G	K	A	F	A	P	Q	P	V	K	T	S	.	Y	G	T	Y	E	D	C	K	D	A	D	I	V	C	I	C	A
Template Known Secondary structure												S					.										T			S							S	S														T	G	G	G	S	S	S						.				G	G	G	G	T	T		S
Template Predicted Secondary structure																	.																																															.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	S	A	D	N	P	E	I	V	A	A	H	E	A	R	I	P	V	I	R	R	A	E	M	L	A	E	L	M	R	F	R	H	G	I	A	I	A	G	T	H	G	K	T	T	T	T	A	M	V	S	S	I	Y	A	E	A	G	L	D	P	T	F	V	N	G
Query Conservation
Alig confidence																.	.	.	.																								.	.	.	.	.
Template Conservation																.	.	.	.																								.	.	.	.	.
Template Sequence		G	A	N	R	L	E	L	V	E	K	N	L	K	I	.	.	.	.	F	K	G	I	V	S	E	V	M	A	S	G	F	D	G	I	F	L	V	A	T	N	P	.	.	.	.	.	V	D	I	L	T	Y	A	T	W	K	F	S	G	L	P	K	E	R	V	I	G
Template Known Secondary structure		S				T	T									.	.	.	.										T	T	T			S						S	S	S	.	.	.	.	.																G	G	G
Template Predicted Secondary structure																.	.	.	.																								.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions