Job Description P17952 Confidence 99.79% Date Thu Jan 5 11:36:25 GMT 2012 Rank 29 Aligned Residues 123 % Identity 24% Template c3mvnA_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamayl-medo- PDBTitle: crystal structure of a domain from a putative udp-n-acetylmuramate:l-2 alanyl-gamma-d-glutamayl-medo-diaminopimelate ligase from haemophilus3 ducreyi 35000hp Resolution 1.90 Å

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		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	D	F	L	G	E	F	P	L	E	P	V	N	G	K	S	G	T	A	M	L	V	D	D	Y	G	H	H	P	T	E	V	D	A	T	I	K	A	A	R	A	G	W	P	D	K	N	L	V	M	L	F	Q	P	H	R	F	T	R	T	R	D	L	Y	D	D	F	A	N	V	L	T	Q	V	D	T	L	L	M
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Template Sequence		R	L	E	V	K	G	.	.	.	.	.	.	.	.	.	V	V	N	N	I	T	V	Y	D	D	F	A	H	H	P	T	A	I	T	A	T	I	D	A	L	R	A	K	V	G	Q	Q	R	I	L	A	V	L	E	P	R	K	H	.	.	.	.	.	.	.	.	E	L	A	T	S	L	Q	D	A	D	S	V	F	I
Template Known Secondary structure								.	.	.	.	.	.	.	.	.			T	T										S																T	T	S												.	.	.	.	.	.	.	.							T	T		S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Template SS confidence
		317	.	.	320	.	.										.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.									.	.	.	.	370	.	.	.	.	.	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	V	Y	P	A	G	E	A	P	I	P	G	A	D	S	R	S	L	C	R	T	I	R	G	R	G	K	I	D	P	I	L	V	P	D	P	A	R	V	A	E	M	L	A	P	V	L	T	G	N	D	L	I	L	V	Q	G	A	G	N	I	G	K	I	A	R	S	L	A	E	I	K	L
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Q	P	W	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	E	V	L	A	N	L	A	Q	P	A	I	S	A	D	D	V	D	E	L	V	X	R	I	V	Q	Q	A	K	P	N	D	H	I	L	I	X	S	N	G	A	F	G	G	I	H	Q	K	L	L	T	A	L	A
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T			S						S	S														T	T								S	S		G	G	G									T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		389	390	.	.	.															.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions