Job Description P17952 Confidence 97.74% Date Thu Jan 5 11:36:25 GMT 2012 Rank 40 Aligned Residues 129 % Identity 22% Template c3gg2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:sugar dehydrogenase, udp-glucose/gdp-mannose PDBTitle: crystal structure of udp-glucose 6-dehydrogenase from2 porphyromonas gingivalis bound to product udp-glucuronate Resolution 1.70 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.																				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	I	H	F	V	G	I	G	G	A	G	M	G	G	I	A	E	V	L	A	N	E	G	Y	Q	I	S	G	S	D	L	A	P	N	P	V	T	Q	Q	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	G	A	T	I	Y	F	N	H	R	P	E	N	V	R	D	A	S	V
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																					.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																					.
Template Sequence		D	I	A	V	V	G	I	G	Y	V	G	L	.	V	S	A	T	C	F	A	E	L	G	A	N	V	R	C	I	D	T	D	R	.	N	K	I	E	Q	L	N	S	G	T	I	P	I	Y	E	P	G	L	E	K	M	I	A	R	N	V	K	A	G	R	L	R	F	G	T	E	I	E	Q	A	V	P	E	A	D	I
Template Known Secondary structure									S					.									T	T								S			.								T	T			S	S			T	T											T	T	S					S						G	G	G		S
Template Predicted Secondary structure														.																					.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150
Predicted Secondary structure										.	.	.	.	.	.																																																							.	.	.	.	.
Query SS confidence										.	.	.	.	.	.																																																							.	.	.	.	.
Query Sequence		V	V	V	S	S	A	I	S	.	.	.	.	.	.	A	D	N	P	E	I	V	A	A	H	E	A	R	I	P	V	I	R	R	A	E	M	L	A	E	L	M	R	F	R	H	G	I	A	I	A	G	T	H	G	K	T	T	T	T	A	M	V	S	S	I	Y	A	E	.	.	.	.	.	A	G	L	D	P	T	F
Query Conservation										.	.	.	.	.	.																																																							.	.	.	.	.
Alig confidence										.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	I	A	V	G	T	P	A	G	E	D	G	S	A	D	M	S	Y	V	L	D	A	A	R	S	.	.	.	.	.	.	.	.	.	.	I	G	R	A	M	S	R	Y	I	L	I	V	T	K	S	T	V	P	V	G	S	Y	R	L	I	R	K	A	I	Q	E	E	L	D	K	R	E	V	L	I	D	F	D	I
Template Known Secondary structure										B		T	T	S	S	B												.	.	.	.	.	.	.	.	.	.							S								S				T	T																T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.											.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	G	G	L	V	K	A	A	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	N	P	E	F	L	K	E	G	N
Template Known Secondary structure										T	T	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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