Job Description P17952 Confidence 96.74% Date Thu Jan 5 11:36:25 GMT 2012 Rank 144 Aligned Residues 93 % Identity 18% Template c3donA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from staphylococcus2 epidermidis Resolution 2.10 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.
Predicted Secondary structure																													.																																									.	.					.	.	.	.	.	.
Query SS confidence																													.																																									.	.					.	.	.	.	.	.
Query Sequence		R	V	R	H	I	H	F	V	G	I	G	G	A	G	M	G	G	I	A	E	V	L	A	N	E	G	Y	.	Q	I	S	G	S	D	L	A	P	N	P	V	T	Q	Q	L	M	N	L	G	A	T	I	Y	F	N	H	R	P	E	N	V	R	D	A	S	V	V	V	V	.	.	S	S	A	I	.	.	.	.	.	.
Query Conservation																													.																																									.	.					.	.	.	.	.	.
Alig confidence																			.										.										.																															.	.					.	.	.	.	.	.
Template Conservation																			.																				.
Template Sequence		E	D	A	Y	I	L	I	L	G	A	G	G	A	S	K	G	I	.	A	N	E	L	Y	K	I	V	R	P	T	L	T	V	A	N	R	T	M	.	S	R	F	N	N	W	S	L	N	I	N	K	I	N	L	S	H	A	E	S	H	L	D	E	F	D	I	I	I	N	T	T	P	D	S	V	I	S	L	N	R	L
Template Known Secondary structure		G	G									S							.						T	T			S							S		G	.	G	G	G	T	T			S													T	G	G	G		S										S	S			T	T
Template Predicted Secondary structure																			.																				.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
														89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	A	D	N	P	E	I	V	A	A	H	E	A	R	I	P	V	I	R	R	A	E	M	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	H	T	L	V	S	D	I	V	Y	N	P	Y	K	T	P	I	L	I	E	A	E	Q	R	G	N	P	I	Y	N	G	L	D	M	F
Template Known Secondary structure			S	S						S			S	S	S	S										T	T						T
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions