Job Description P17952 Confidence 97.57% Date Thu Jan 5 11:36:25 GMT 2012 Rank 55 Aligned Residues 163 % Identity 13% Template c3d1lB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative nadp oxidoreductase bf3122; PDBTitle: crystal structure of putative nadp oxidoreductase bf3122 from2 bacteroides fragilis Resolution 2.19 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	R	H	I	H	F	V	G	I	G	G	A	G	M	G	G	I	A	E	V	L	A	N	E	G	Y	Q	I	S	G	S	D	L	A	P	N	P	V	T	Q	Q	L	M	N	L	G	A	T	I	Y	F	N	H	R	P	E	N	V	R	D	A	S	V	V	V	V	S	S	A	I	S	A	D	N	P	E	I	V	A
Query Conservation
Alig confidence																.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	T	P	I	V	L	I	G	A	G	N	L	A	.	T	N	L	A	K	A	L	Y	R	K	G	F	R	I	V	Q	V	Y	S	R	T	E	E	S	A	R	E	L	A	Q	K	V	E	A	E	Y	T	T	D	L	A	E	V	N	P	Y	A	K	L	Y	I	V	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G									S				.										T	T									S	S											T	T					S		G	G	G	S		S			S						.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		A	H	E	A	R	I	P	V	I	R	R	A	E	M	L	A	E	L	M	R	F	R	H	.	.	G	I	A	I	A	G	T	H	G	K	T	T	T	T	A	M	V	S	S	I	Y	A	E	A	G	L	D	P	T	F	V	N	G	G	L	V	K	A	A	G	V	H	A	R	L	G	H	G	R	Y	L	I	A	E	A
Query Conservation																									.	.
Alig confidence		.	.	.	.	.																			.	.															.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																			.	.	.	.	.	.
Template Sequence		.	.	.	.	.	L	K	D	S	A	F	A	E	L	L	Q	G	I	V	E	G	K	R	E	E	A	L	X	V	H	T	A	G	S	I	P	X	N	V	.	.	.	.	.	.	W	E	G	H	V	P	H	Y	G	V	F	Y	P	X	Q	T	F	S	K	Q	R	E	V	D	F	K	E	I	P	F	F	I	E	A	S
Template Known Secondary structure		.	.	.	.	.															T	T			T	T								S	S	S		G	G	G	.	.	.	.	.	.	G	T	T	T		S	S								S			B	T	T	B				G	G	G								S
Template Predicted Secondary structure		.	.	.	.	.																																			.	.	.	.	.	.
Template SS confidence
							73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.							.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		176	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		D	E	.	.	S	D	A	S	F	L	H	L	Q	P	M	V	A	I	V	T	N	I	E	A	D	H	M	D	T	Y	Q
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		S	T	E	D	A	A	F	L	K	A	I	A	S	T	L	S	N	R	V	Y	D	A	D	S	E	Q	R	K	S	L	H
Template Known Secondary structure		S													T	T		S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions