Job Description P17952 Confidence 96.64% Date Thu Jan 5 11:36:25 GMT 2012 Rank 151 Aligned Residues 131 % Identity 13% Template c2v65A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase a chain; PDBTitle: apo ldh from the psychrophile c. gunnari Resolution 2.35 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.								.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																	.	.																			.	.	.	.	.	.	.
Query SS confidence																																	.	.																			.	.	.	.	.	.	.
Query Sequence		P	E	M	R	R	V	R	H	I	H	F	V	G	I	G	G	A	G	M	G	G	I	A	E	V	L	A	N	E	G	Y	.	.	Q	I	S	G	S	D	L	A	P	N	P	V	T	Q	Q	L	M	N	.	.	.	.	.	.	.	L	G	A	T	I	Y	F	N	H	R	P	E	N	V	R	D	A	S	V	V	V	V
Query Conservation																																	.	.																			.	.	.	.	.	.	.
Alig confidence																							.										.	.																			.	.	.	.	.	.	.
Template Conservation																							.
Template Sequence		E	P	V	G	S	R	S	K	V	T	V	V	G	V	G	M	V	G	M	A	S	.	A	I	S	I	L	L	K	D	L	C	D	E	L	A	M	V	D	V	M	E	D	K	L	K	G	E	V	M	D	L	Q	H	G	S	L	F	L	K	T	K	I	V	G	D	K	D	Y	S	V	T	A	N	S	K	V	V	V	V
Template Known Secondary structure							S	S								S							.							T	T			S							S														T	T	G	G	G			S						S	S	G	G	G	G	T	T		S
Template Predicted Secondary structure																							.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		S	S	A	I	S	A	D	N	P	E	I	V	A	A	H	E	A	R	I	P	V	I	R	R	.	A	E	M	L	A	E	L	M	R	F	R	H	G	I	A	I	A	G	T	H	G	K	T	T	T	T	A	M	V	S	S	I	Y	A	E	A	G	L	D	P	T	F	V	N	G
Query Conservation																										.
Alig confidence									.	.	.															.																						.	.	.	.	.
Template Conservation									.	.	.																																					.	.	.	.	.
Template Sequence		T	A	G	A	G	E	S	.	.	.	R	L	N	L	V	Q	R	N	V	N	I	F	K	F	I	I	P	N	I	V	K	Y	S	P	N	C	I	L	M	V	V	S	N	P	V	D	.	.	.	.	.	I	L	T	Y	V	A	W	K	L	S	G	F	P	R	H	R	V	I	G
Template Known Secondary structure									.	.	.																								T	T							S	S	S			.	.	.	.	.									T	T				G	G	G
Template Predicted Secondary structure									.	.	.																																					.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions