Job Description P17952 Confidence 95.17% Date Thu Jan 5 11:36:25 GMT 2012 Rank 366 Aligned Residues 84 % Identity 15% Template c2ldxA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-lactate dehydrogenase; PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4 Resolution 2.96 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																	.	.																								.	.																			.	.	.	.	.	.	.	.
Query SS confidence																	.	.																								.	.																			.	.	.	.	.	.	.	.
Query Sequence		A	K	L	R	S	I	V	P	E	M	R	R	V	R	H	.	.	I	H	F	V	G	I	G	G	A	G	M	G	G	I	A	E	V	L	A	N	E	G	Y	.	.	Q	I	S	G	S	D	L	A	P	N	P	V	T	Q	Q	L	M	N	.	.	.	.	.	.	.	.	L	G	A	T	I	Y	F	N	H	R	P	E
Query Conservation																	.	.																								.	.																			.	.	.	.	.	.	.	.
Alig confidence																	.	.												.												.	.																			.	.	.	.	.	.	.	.
Template Conservation																														.
Template Sequence		E	Q	L	I	Q	N	L	V	P	E	D	K	L	S	R	C	K	I	T	V	V	G	V	G	D	V	G	M	.	A	C	A	I	S	I	L	L	K	G	L	A	D	E	L	A	L	V	D	A	D	T	D	K	L	R	G	E	A	L	D	L	Q	H	G	S	L	F	L	S	T	P	K	I	V	F	G	K	D	Y	N
Template Known Secondary structure									S	S															S					.								T	T	T	S		S							S															T	T	T	T		S								S	S	G	G
Template Predicted Secondary structure																														.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	R	D	A	S	V	V	V	V	S	S	A	I	S	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	A	N	S	K	L	V	I	I	T	A	G	A	R	M	V
Template Known Secondary structure		G	G	T	T									S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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