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Job DescriptionP17952
Confidence97.61%DateThu Jan 5 11:36:25 GMT 2012
Rank50Aligned Residues91
% Identity23%Templatec2hk8B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from aquifex2 aeolicus at 2.35 angstrom resolution
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVSSAISAD. . . . . . . .
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Template Sequence  KSILVLGAGGASRAV. IYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVV. NSPEEVIDKVQVIVNTTSVGLKDEDPEIFN
Template Known Secondary structure 


S.TT

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GGGTGGG
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SSTTSSTT


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   124.....130........ .140.........150.........160.........170. ........180.........190.........200.
 
   92.......100.........110..
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Query Sequence  . . . . . . . . . . . . . . . . . NPEIVAAHEARIPVIRRAEML
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Template Sequence  YDLIKKDHVVVDIIYKETKLLKKAKEKGAKLLDGLPML
Template Known Secondary structure  GGG

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   202.......210.........220.........230.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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