Job Description P17952 Confidence 96.98% Date Thu Jan 5 11:36:25 GMT 2012 Rank 121 Aligned Residues 96 % Identity 18% Template c1p74B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from2 haemophilus influenzae Resolution 2.40 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.																																			.	.	.	.	.	.
Query SS confidence																																							.	.	.																																			.	.	.	.	.	.
Query Sequence		R	V	R	H	I	H	F	V	G	I	G	G	A	G	M	G	G	I	A	E	V	L	A	N	E	G	Y	Q	I	S	G	S	D	L	A	P	N	.	.	.	P	V	T	Q	Q	L	M	N	L	G	A	T	I	Y	F	N	H	R	P	E	N	V	R	D	A	S	V	V	V	V	S	S	A	I	.	.	.	.	.	.
Query Conservation																																							.	.	.																																			.	.	.	.	.	.
Alig confidence																			.																				.	.	.																																			.	.	.	.	.	.
Template Conservation																			.
Template Sequence		P	N	Q	H	V	L	I	L	G	A	G	G	A	T	K	G	V	.	L	L	P	L	L	Q	A	Q	Q	N	I	V	L	A	N	R	T	F	S	K	T	K	E	L	A	E	R	F	Q	P	Y	G	N	I	Q	A	V	S	M	D	S	I	P	L	Q	T	Y	D	L	V	I	N	A	T	S	A	A	S	V	D	A	E
Template Known Secondary structure		T	T								S	S	T	T	T	T	T	T	.							T	T								S	S												G	G	G	S							G	G	G				S		B	S
Template Predicted Secondary structure																			.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
																89		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.		.																.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.		.																.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	.	A	D	N	P	E	I	V	A	A	H	E	A	R	I	P	.	V	I	R	R	A	E	M	L	A	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.		.																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.		.																.
Template Conservation
Template Sequence		I	L	K	L	G	S	A	F	Y	D	M	Q	Y	A	K	G	T	D	T	P	F	I	A	L	C	K	S	L	G	L	T	N	V	S	D	G	F	G	M	L	V	A
Template Known Secondary structure				T	T	B	S					S				S	S	S											T	T							S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions