Job Description P17952 Confidence 97.43% Date Thu Jan 5 11:36:25 GMT 2012 Rank 65 Aligned Residues 129 % Identity 22% Template c1mv8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa Resolution 1.55 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	I	H	F	V	G	I	G	G	A	G	M	G	G	I	A	E	V	L	A	N	E	G	Y	Q	I	S	G	S	D	L	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	V	T	Q	Q	L	M	N	L	G	A	T	I	Y	F	N	H	R	P	E	N	V	R	D	A	S	V	V
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.
Template Sequence		R	I	S	I	F	G	L	G	Y	V	G	A	.	V	C	A	G	C	L	S	A	R	G	H	E	V	I	G	V	D	V	S	S	T	K	I	D	L	I	N	Q	G	K	S	P	I	V	E	P	G	L	E	A	L	L	Q	Q	G	R	Q	T	G	R	L	S	G	T	T	D	F	K	K	A	V	L	D	S	D	V	S
Template Known Secondary structure									S	T	T			.									T	T								S										T	T			S	S			T	T											T	T						S								T		S
Template Predicted Secondary structure														.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		83	.	.	.	.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.																																.	.	.																								.	.	.	.	.
Query SS confidence									.	.	.	.	.	.																																.	.	.																								.	.	.	.	.
Query Sequence		V	V	S	S	A	I	S	.	.	.	.	.	.	A	D	N	P	E	I	V	A	A	H	E	A	R	I	P	V	I	R	R	A	E	M	L	A	E	L	M	R	F	R	H	.	.	.	G	I	A	I	A	G	T	H	G	K	T	T	T	T	A	M	V	S	S	I	Y	A	E	.	.	.	.	.	A	G	L	D	P
Query Conservation									.	.	.	.	.	.																																.	.	.																								.	.	.	.	.
Alig confidence									.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.										.	.	.																								.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.
Template Sequence		F	I	C	V	G	T	P	S	K	K	N	G	D	L	D	L	G	Y	I	E	T	V	C	R	E	.	.	.	.	.	.	.	.	.	.	I	G	F	A	I	R	E	K	S	E	R	H	T	V	V	V	R	S	T	V	L	P	G	T	V	N	N	V	V	I	P	L	I	E	D	C	S	G	K	K	A	G	V	D	F
Template Known Secondary structure									B		T	T	S	S	B												.	.	.	.	.	.	.	.	.	.						T	T			S								S				T	T					T										S			B	T	T	T	B
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.											.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		149	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	V	N	G	G	L	V	K	A	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	G	T	N	P	E	F	L	R	E	S
Template Known Secondary structure												T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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