 |
Job Description | P17952 | Confidence | 97.07% | Date | Thu Jan 5 11:36:25 GMT 2012 |
Rank | 111 | Aligned Residues | 69 |
% Identity | 13% | Template | c1m67A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; |
PDBTitle: crystal structure of leishmania mexicana gpdh complexed with inhibitor2 2-bromo-6-hydroxy-purine
|
Resolution | 2.50 Å |
|
 |
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | M | R | R | V | R | H | I | H | F | V | G | I | G | G | A | G | M | G | G | I | A | E | V | L | A | N | E | G | Y | Q | I | S | G | S | D | L | A | P | N | P | V | T | Q | Q | L | M | N | L | G | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | I | Y | F | N | H | R | P | E | N | V | R | D | A | S | V |
Query Conservation |   |
  |   |   |   |   |
|   |
|   |   |
|
|   |
|
|   |
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
|   |
|
|
|
|
|   |
|
| . |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   | . |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
E | L | L | Y | L | N | K | A | V | V | F | G | S | G | A | F | G | . |
T | A | L | A | M | V | L | S | K | K | C | R | E | V | C | V | W | H | M | N | E | . |
E | E | V | R | L | V | N | E | K | R | E | N | V | L | F | L | K | G | V | Q | L | A | S | N | I | T | F | T | S | D | V | E | K | A | Y | N | G | A | E | I |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
| S |  |  |  | . |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
| S |
|  | . |  |  |  |  |  |  |  |  |  | T | S |
| T | T | T | S | T | T |
|
|
|
| T | T |  |  |  |  | S |
|  |  |  |  |  | T | T |
| S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
  |
  |   |
82 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
V | V | V | S |
Query Conservation |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|
|   |   |
Template Sequence |   |
I | L | F | V |
Template Known Secondary structure |   |
 |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
89 | 90 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|