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Job DescriptionP24171
Confidence100.00%DateThu Jan 5 11:40:46 GMT 2012
Rank8Aligned Residues534
% Identity11%Templated1uzea_
SCOP infoZincin-like Metalloproteases ("zincins"), catalytic domain Neurolysin-like
Resolution1.82

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70.........80.........90.........100.........110.........120.........130
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Query Sequence  QMPDFNNTILALEQSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAELANDIYLNGELFARVDAVWQRRESLGLDS
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Template Conservation 
   
   
         
      
     
           
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Template Sequence  DEAEASKFVEEYDRTSQVVWNEYAEANWNYNTNITTETSKILLQKNMQIANHTLKYG. . . . . . . . . TQARKFDVNQLQNT
Template Known Secondary structure 
TS

.........TTS
GGG


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   40.........50.........60.........70.........80.........90...... ...100.........110
 
   131........140.........150.........160.........170.........180.........190.........200.........210
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Query Sequence  ESIRLVEVIHQRFVLAGAKLAQADKAKLKVLNTEAATLTSQFNQRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAARE
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Template Conservation       
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Template Sequence  TIKRIIKKVQDLER. . . AALPAQELEEYNKILLDMETTYSVAT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T

GG...GGS

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   111........120.... .....130.........140.........150
 
   211........220.........230.........240.........250.........260.........270.........280.........290
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Query Sequence  KGLDNKWLIPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQATLLGFPHYAAWKIADQM
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Template Sequence  . VCHPNGSCLQLEPDLTNVMATSRKYEDLLWAWEGWRDKAGRA. . . . ILQFYPKYVELINQAARLNGYVDAGDSWRSM. .
Template Known Secondary structure  .
SSS
TTT


T....TTTTT
SSGG..
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   151........160.........170.........180.........190.. .......200.........210.........220...
 
   291........300.........310.........320.........330....... ..340.........350.........360........
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Query Sequence  AKTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQPWDW. . AFYAEQVRREKFDLDEAQLKPYFELNTVLNE
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Template Sequence  . YETPSLEQDLERLFQELQPLYLNLHAYVRRALHRHYGAQHINLEGPIPAHLLGNMWAQTWSNIYDLVVPFPS. . . . . . A
Template Known Secondary structure  .G

TTT
TTT

TTS
TTSSSSTTSS

GGG
S
TT......S
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   224.....230.........240.........250.........260.........270.........280.........290..... .
 
   369370.........380.........390.........400.........410.........420.........430.........440........
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Query Sequence  GVFWTANQLFGIKFVERFDIPVYHPDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTLNKTHPVIYNVCN
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Template Sequence  PSMDTTEAMLKQGW. . . TPRRMFKEADDFFTSLGLLPVPPEFWNKSMLEKPTDGREVVCHASAW. . . DFYNGKDFRIKQC
Template Known Secondary structure 



TT
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TT





B
S


SS




S
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SSSS


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   297..300.........310 .........320.........330.........340.........350....... ..360.........370
 
   449450.........460.........470.........480.........490.........500.........510.........520........
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Query Sequence  YQKPAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYATLSGTNTPRDFVEFPSQINEHWATHPQVFARYARHYQSGAAM
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Template Sequence  TTV. . . . . . . . . NLEDLVVAHHEMGHIQYFMQYKDLPVALREGANPG. FHEAIGDVLALSVSTPKHLHSLNL. LSSDEHD
Template Known Secondary structure 

S.........STTTS
GGG
S
SS.TSTTS.


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   371.. ......380.........390.........400........ .410.........420.........430.. .......
 
   529530.........540.........550.........560.........570.........580....... ..590.........600....
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Query Sequence  PDELQQKMRNASLFNKGYEMSELLSAALLDMRWHCLEENEAMQDVDDFELRALVAENMD. . . . LPAIPPRYRSSYFAHIF
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Template Sequence  INFLMKMALDKIA. . . . . FIPFSYLVDQWRWRVF. . . DGSITKENYNQEWWSLRLKYQGLCPPVPRTQGDFDPGAKFHI.
Template Known Secondary structure  ........TTSS
TTT

SS


TT

GGGGSTTT.
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   444.....450...... ...460.........470.. .......480.........490.........500.........510....
 
   605....610.........620.........630..... ....640.........650.........660..... ....670..
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Query Sequence  GGGYAAGYYAYLWTQMLADDGYQWFVEQGGL. . . . . . . . . . . TRENGLRFREAILSRGNSEDLERLYRQWRG. KAPKIMP
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Template Sequence  . . PSSVPYIRYFVSFIIQFQFHEALCQAAGHTGPLHKCDIYQSKEAGQRLAT. AMKLGFSRPWPEAMQLITGQPNMSASA
Template Known Secondary structure  ..TTT


TT

S
GGG


TT
.TTTTSS
SS
S

S
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   515....520.........530.........540.........550.........560.... .....570.........580.........590.
 
   673...
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Query Sequence  MLQH
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Template Conservation 

 
Template Sequence  MLSY
Template Known Secondary structure 
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   592...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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