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Job DescriptionP24171
Confidence100.00%DateThu Jan 5 11:40:46 GMT 2012
Rank13Aligned Residues461
% Identity15%Templated1k9xa_
SCOP infoZincin-like Metalloproteases ("zincins"), catalytic domain Neurolysin-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70......... 80.........90.........100.........110.........120.........130...
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Query Sequence  NTILALEQSGELLTRVTSVFFAM. . . TAAHTNDELQRLDEQFSAELAELANDIYLNGELFARVDAVWQRRESLGLDSESI
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Template Sequence  ETIKQILAKYRRIWAIGHAQSVLGWDLEVNMPKEGILERSVAQGELSVLSHELLLHPEFVNLVEKA. . . KGLENLNEYER
Template Known Secondary structure  T

GGGT
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   8.10.........20.........30.........40.........50.........60.........70... ......80....
 
   134.....140.........150.........160.........170.........180.........190.........200.........210...
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Query Sequence  RLVEVIHQRFVLAGAKLAQADKAKLKVLNTEAATLTSQFNQRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAAREKGL
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Template Sequence  GIVRVLDRSIRIA. RAFPPEFIREVSETTSLATK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  .TSS
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   85....90....... ..100.........110.......
 
   214.....220.........230.........240.........250.........260.........270.........280.........290 .
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Query Sequence  DNKWLIPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQATLLGFPHYAAWKIADQM. . A
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AWEEAKAKDDFSKFEPWLDKIISLAKRAAEYLGYEEEPYDALLDLYEEG
Template Known Secondary structure  ...............................TT
GGGT

SS
STT
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   118.120.........130.........140.........150.........160......
 
   292.......300.........310.........320.........330.........340.........350.........360.........370.
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Query Sequence  KTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQPWDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVF
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Template Sequence  LRTRDVEKMFEVLEKKLKPLLDKILE. . . . . . . . . . . . . . . . . . . . . . . . . . . . EGKVPREHPLEKEKYEREWME. RVNL
Template Known Secondary structure 

T............................
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S

GGGT
B

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   167..170.........180.........190.. .......200.........210... ....
 
   372.......380.........390.........400.........410.........420.........430.........440.........450.
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Query Sequence  WTANQLFGIKFVERFDIPVYHPDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTLNKTHPVIYNVCNYQK
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Template Sequence  WILQKF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GFPLGTRARLDVSAHPFTTEFGIRDV. . . . . . . . RITTRYEG
Template Known Secondary structure  ................................T

BTTT
SS

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   218.220... ......230.........240......... 250.......
 
   452.......460. ........470.........480....... ..490.........500......... 510.........520...
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Query Sequence  PAAGEPALLL. . WDDVITLFHEFGHTLHGLFARQRYAT. LSGTNTPRDFVEFPSQINEHWA. . . . . THPQVFARYARHYQ
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Template Sequence  . . . . . . . . . YDFRRTILSTVHEFGHALYELQQDERFMFTPIAGGVSLGIHESQSRFWENIIGRSKEFVELIYPVLKENLP
Template Known Secondary structure  .........B
TTS
GGGTTSTTSS
S
TTTTTS
G
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   258.260.........270.........280.........290.........300.........310.........320........
 
   524.....530.........540.........550.........560... ......570.........580.........590.........
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Query Sequence  SGAAMPDELQQKMRNASLFNKGYEMSELLSAALLDMRWHC. . . . LEENEAMQDVDDFELRALVAENMDLPAIPPRYRSSY
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Template Sequence  FMSNYTPEDVYLYFNIVRPDFIRTEADVVTYNFHILLRFKLERLMVSEEIKAKDLPEMWNDEMERLLGIRPRKYSEGILQ
Template Known Secondary structure  GGGG

T




S
GGG

TTTS


GGGS


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   329330.........340.........350.........360.........370.........380.........390.........400........
 
   600.........610.........620.........630.... .....640.........650.........660.........670
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Query Sequence  FAHIFGGGYAAGYYAYLWTQMLADDGYQWFVEQGG. . . . . . . . . LTRENGLRFREAILSRGNSEDLERLYRQWRGKAPKI
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Template Sequence  DIHWAH. GSIGYFPTYTIGTLLSAQLYYHIKKDIPDFEEKVAKAEFDPIKAWLREKIHRWGSIYPPKELLKKAIGEDMDA
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S.T

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TTTSTTT

TGGGTTSS
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   409410.... .....420.........430.........440.........450.........460.........470.........480.......
 
   671......
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Query Sequence  MPMLQHR
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Template Conservation       

Template Sequence  EYFVRWV
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   488.490....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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