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Job DescriptionP24171
Confidence100.00%DateThu Jan 5 11:40:46 GMT 2012
Rank15Aligned Residues462
% Identity15%Templatec3hq2A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:bacillus subtilis m32 carboxypeptidase; PDBTitle: bsucp crystal structure
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110.........120.........130...
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Query Sequence  DFNNTILALEQSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAELANDIYLNGELFARVDAVWQRRESLGLDSESI
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Template Sequence  TYEKEFFDLLKRISHYSEAVALMHWDSRTGAPKNGSEDRAESIGQLSTDIFNIQTSDRMKELIDVLYE. . RFDDLSEDTK
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TTT

TTS
..TGGGS
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   5....10.........20.........30.........40.........50.........60.........70.. .......80..
 
   134.....140.........150.........160.........170.........180.........190.........200.........210...
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Query Sequence  RLVEVIHQRFVLAGAKLAQADKAKLKVLNTEAATLTSQFNQRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAAREKGL
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Template Sequence  KAVELAKKEYEEN. KKIPEAEYKEYVILCSKAET. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  .TTS
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   83......90..... ....100.........110.....
 
   214.....220.........230.........240.........250.........260.........270........ .280.........290.
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Query Sequence  DNKWLIPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQATLLGF. PHYAAWKIADQMA.
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AWEEAKGKSDFSLFSPYLEQLIEFNKRFITYWGYQEHPYDALLDLFEPG
Template Known Secondary structure  ...............................TT


SS
TTSTT
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   116...120.........130.........140.........150.........160....
 
   292.......300.........310.........320.........330.........340.........350.........360.........370.
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Query Sequence  KTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQPWDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVF
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Template Sequence  VTVKVLDQLFAELKEAIIPL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . VKQVTASGNKPDTSFITKAFPKEKQK. . ELS
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.............................SSTT



TTTSS


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   165....170.........180.... .....190.........200.........210 ...
 
   372.......380.........390.........400.........410.........420.........430.........440.........450.
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Query Sequence  WTANQLFGIKFVERFDIPVYHPDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTLNKTHPVIYNVCNYQK
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Template Sequence  LYFLQELGYDFDGG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RLDETVHPFATTLNR. GDVR. . . . . . . VTTRYDE
Template Known Secondary structure  TT

TTS
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T.T.......


T
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   214.....220....... ..230.........240.. .... ...250...
 
   452.......460.........470.........480....... ..490.........500......... 510.........520.......
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Query Sequence  PAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYAT. LSGTNTPRDFVEFPSQINEHWA. THPQVFARYARHYQSGAA. .
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Template Sequence  KD. . . . . . . FRTAIFGTIHECGHAIYEQNIDEALSGTNLSDGASMGIHESQSLFYENFIGRNKHFWTPYYKKIQEASPVQ
Template Known Secondary structure  T
.......TTTS
GGGTTSSSSS
S
TTTTTSGGGGTTTSTTT
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   254. ....260.........270.........280.........290.........300.........310.........320......
 
   528.530.........540... ......550.........560.........570.........580.........590.......
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Query Sequence  MPDELQQKMRNASLFN. . . . . . . . . . KGYEMSELLSAALLDMRWHCLEENEAMQDVDDFELRALVAENMDLPAIPPRYRS
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Template Sequence  FKDISLDDFVRAINESKPSFIRVEADELTYPLHIIIRYEIEKAIFS. . . NEVSVEDLPSLWNQKYQDYLGITPQTDAEGI
Template Known Secondary structure  TTT

T




S
GGG

TTTT...T
S
GGGS


SSTTTTT
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   327..330.........340.........350.........360.........370.. .......380.........390.........400...
 
   598.600.........610.........620.........630.... .....640.........650.........660........
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Query Sequence  SYFAHIFGGGYAAGYYAYLWTQMLADDGYQWFVEQGG. . . . . . . . . LTRENGLRFREAILSRGNSEDLERLYRQWRGKAP
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Template Sequence  LQDVHWAG. GDFGYFPSYALGYMYAAQLKQKMLEDLPEFDALLERGEFHPIKQWLTEKVHIHGKRKKPLDIIKDATGEEL
Template Known Secondary structure  TS
STTTT.T
TT
T
TTT

TTTTTTSS
SSS
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   404.....410. ........420.........430.........440.........450.........460.........470.........480..
 
   669670.......
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Query Sequence  KIMPMLQHR
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Template Sequence  NVRYLIDYL
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   483......490.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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