 |
Job Description | P24171 | Confidence | 92.91% | Date | Thu Jan 5 11:40:46 GMT 2012 |
Rank | 41 | Aligned Residues | 104 |
% Identity | 17% | Template | c2xhqA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:archaemetzincin; |
PDBTitle: crystal structure of archaemetzincin (amza) from archaeoglobus2 fulgidus at 1.45 a resolution
|
Resolution | 1.45 Å |
|
 |
  |   |
362 | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | |
|
|
|
. | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
| . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | T | V | L | N | E | G | V | F | W | T | A | N | Q | L | F | G | I | K | F | V | E | R | F | D | I | . |
. |
. |
. |
P | V | Y | H | P | D | V | R | V | W | E | I | F | D | . |
. |
. |
. |
. |
. |
H | N | G | V | G | L | A | L | F | Y | G | D | F | F | A | R | D | S | K | S | G | G | A | W | M | G | N | F | V |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   | . | . | . | . |
|   |
|   |   |   |
|   |   |   |   |
|   |   | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|   |   |
|
|
|   | . |   |   |   |
| . | . | . |
|
|
|
|   |
|
Template Sequence |   |
V | N | S | H | T | V | E | V | L | A | N | S | L | P | K | I | F | N | A | E | V | F | V | L | P | A | S | D | V | S | L | K | C | Y | N | A | S | R | R | Q | Y | N | S | T | C | I | L | R | M | L | P | P | I | K | V | T | L | G | V | T | G | K | D | I | Y | A | . |
K | G | M | N | . |
. |
. |
F | V | F | G | E | A |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |
|
|
| B |
|
|
| G | G | G |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  |  | S |
|
|
| S | S |  |  |  |  |  | S | S |
|  |  |
| . | T | T |
| S | . | . | . |
| B | S |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . |
|
|
|
| . | . | . |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
. | . | . | . | |
|
|
80 | . | . | . | . | . |
  |
  |   |
432 | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Q | S | T | L | N | K | T | H | P | V | I | Y | N | V | C | N | Y | Q | K | P | A | A | G | E | P | A | L | L | L | W | D | D | V | I | T | L | F | H | E | F | G | H | T | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |
|
|   |
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   | . | . | . | . | . | . | . |
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|   |   |
Template Sequence |   |
E | L | G | G | A | . |
. |
. |
. |
. |
. |
. |
R | A | V | L | S | V | F | R | L | T | T | A | D | S | E | L | Y | R | E | R | V | V | K | E | A | V | H | E | I | G | H | V | L |
Template Known Secondary structure |   |
| T | T | S | S | . | . | . | . | . | . | . |  |  |  |  |  |
| G | G | G |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|