Return to main results Retrieve Phyre Job Id

Job DescriptionP24171
Confidence91.08%DateThu Jan 5 11:40:46 GMT 2012
Rank50Aligned Residues94
% Identity18%Templatec2jsdA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:matrix metalloproteinase-20; PDBTitle: solution structure of mmp20 complexed with nngh
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   364.....370.........380.........390.........400.........410.........420.........430.........440...
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  TVLNEGVFWTANQLFGIKFVERFDIPVYHPDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTLNKTHPVI
Query Conservation    
          


         
 
   
    
        
  


   
 

  

               
  
Alig confidence 



















...............












































Template Conservation     
  
   
     
 
 ...............
                                           
Template Sequence  DKAVEMALQAWSSAVPLSFV. . . . . . . . . . . . . . . RINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDT
Template Known Secondary structure  SS
...............
SSS

S
S
SSSSS


SSSS
S

SSSSSTT
Template Predicted Secondary structure 


...............


























Template SS confidence 















































































   139140.........150........ .160.........170.........180.........190.........200...
 
   444.....450.........460.........470......
Predicted Secondary structure 














Query SS confidence 
































Query Sequence  YNVCNYQKPAAGEPALLLWDDVITLFHEFGHTL
Query Conservation   
  

         

   

 

 





 
Alig confidence 
















....











Template Conservation    
              ....  
  






Template Sequence  HFDNAEKWTMGTNGFNL. . . . FTVAAHEFGHAL
Template Known Secondary structure  TTS
SSSSS....
Template Predicted Secondary structure 













....




Template SS confidence 
































   204.....210.........220 .........230..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions