Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFX7
Confidence2.58%DateThu Jan 5 11:27:30 GMT 2012
Rank41Aligned Residues27
% Identity22%Templatec3ohwB_
PDB info PDB header:protein bindingChain: B: PDB Molecule:phycobilisome lcm core-membrane linker polypeptide; PDBTitle: x-ray structure of phycobilisome lcm core-membrane linker polypeptide2 (fragment 721-860) from synechocystis sp. pcc 6803, northeast3 structural genomics consortium target sgr209e
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30...
Predicted Secondary structure 





Query SS confidence 


























Query Sequence  SALMDGETLDSELLNELAHNPEMQKTW
Query Conservation 


 


    

   
  
 
    
Alig confidence 


























Template Conservation 
 



 







 



  

  
Template Sequence  SKLSNNEINVKEFIEGLGTSELYXKEF
Template Known Secondary structure  TTSS
TS
Template Predicted Secondary structure 






Template SS confidence 


























   765....770.........780.........790.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions