Job Description P24177 Confidence 10.56% Date Wed Jan 25 15:20:44 GMT 2012 Rank 100 Aligned Residues 111 % Identity 12% Template c3eamB_ PDB info PDB header:membrane protein, transport protein Chain: B: PDB Molecule:glr4197 protein; PDBTitle: an open-pore structure of a bacterial pentameric ligand-2 gated ion channel Resolution 2.90 Å

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		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	A	I	A	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	M	G	T	F	S	V	L	Y	A	F	G	Y	S	V	N	T	L	T	M	F	A	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V	E	N	V	E	R	I	M	S	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	M	L	F	I	L	F	I	S	W	T	A	F	W	S	T	S	Y	E	A	N	V	T	L	V	V	S	T	L	I	A	H	I	A	F	N	I	L	V	E	T	N	L	P	K	T	P	Y	M	T	Y	T	G	A	I	I	F	M	I	Y	L	F	Y	F	V	A	V	I	E	V	T	V	Q	H	Y	L	K	V	E
Template Known Secondary structure													G	G	G	G																												T	S				S	S																															T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	T	P	R	E	A	T	R	K	S	M	G	Q	I	Q	G	A	L	V	G	I	A	M	V	L	S	A	V	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	P	A	R	A	A	S	I	T	R	A	S	R	I	A	F	P	V	V	F	L	L	A	N	I	I	L	A	F	L
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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