Job Description P38051 Confidence 100.00% Date Thu Jan 5 11:57:52 GMT 2012 Rank 2 Aligned Residues 419 % Identity 53% Template c3gseA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:menaquinone-specific isochorismate synthase; PDBTitle: crystal structure of menaquinone-specific isochorismate synthase from2 yersinia pestis co92 Resolution 2.28 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	T	T	A	L	E	N	L	L	R	H	L	S	Q	E	I	P	A	T	P	G	I	R	V	I	D	I	P	F	P	L	K	D	A	F	D	A	L	S	W	L	A	S	Q	Q	T	Y	P	Q	F	Y	W	Q	Q	R	N	G	D	E	E	A	V	V	L	G	A	I	T	R	F	T	S	L	D	Q	A	Q	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	S	G	L	L	G	E	L	R	Q	K	L	C	A	G	F	P	E	Q	A	G	I	Q	Q	L	I	F	P	A	P	G	L	V	G	R	Q	L	L	E	W	L	T	A	Q	T	H	F	P	Q	F	Y	W	R	H	R	D	N	H	E	E	A	A	V	C	G	Q	T	R	S	F	A	D	M	K	D	A	D	D	F
Template Known Secondary structure																S				S	S	S											G	G	G	G	G	S							T				S								T	T	S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		L	R	Q	H	P	E	H	A	D	L	R	I	W	G	L	N	A	F	D	.	.	.	.	.	P	S	Q	G	N	L	L	L	P	R	L	E	W	R	R	C	G	G	K	A	T	L	R	L	T	L	F	S	E	S	S	L	Q	H	D	A	I	Q	A	K	E	F	I	A	T	L	V	S	I	K	P	L	P	G	L	H
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.
Template Conservation
Template Sequence		I	Q	Q	N	P	D	A	N	G	L	R	I	W	G	L	N	A	F	E	P	V	M	V	N	A	Q	A	S	F	L	F	L	P	R	L	E	I	L	R	R	G	K	K	T	S	L	T	L	N	L	S	S	E	T	S	L	Q	K	D	A	L	Q	A	I	T	F	I	D	Q	L	M	A	A	R	A	L	P	V	L	N
Template Known Secondary structure				T		T	T		T	T																																T	T											S	S															T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	T	T	R	E	Q	H	W	P	D	K	T	G	W	T	Q	L	I	E	L	A	T	K	T	I	A	E	G	E	L	D	K	V	V	L	A	R	A	T	D	L	H	F	A	S	P	V	N	A	A	A	M	M	A	A	S	R	R	L	N	L	N	C	Y	H	F	Y	M	A	F	D	G	E	N	A	F	L	G	S
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		A	R	I	Q	H	S	S	H	T	P	G	Y	P	Q	W	R	N	L	I	Q	Q	A	.	.	.	L	N	D	I	E	L	D	K	V	V	L	A	R	T	T	T	L	T	L	N	K	P	L	S	C	A	A	F	M	A	A	S	R	Q	V	N	H	R	C	Y	H	F	M	L	R	F	D	D	R	Q	A	F	L	G	S
Template Known Secondary structure											S													.	.	.																				S	S																T	T								S	S	S	S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	E	R	L	W	R	R	R	D	K	A	L	R	T	E	A	L	A	G	T	V	A	N	N	P	D	D	K	Q	A	Q	Q	L	G	E	W	L	M	A	D	D	K	N	Q	R	E	N	M	L	V	V	E	D	I	C	Q	R	L	Q	A	D	T	Q	T	L	D	V	L	P	P	Q	V	L	R	L	R	K	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	E	R	L	Y	L	R	Q	Q	L	H	L	E	T	E	A	L	A	G	T	V	S	N	L	D	S	D	P	Q	A	A	V	L	A	D	W	L	M	H	D	E	K	N	Q	R	E	N	L	L	V	V	D	D	I	C	Q	R	L	Q	G	G	V	T	A	V	D	V	M	P	P	E	I	I	R	L	R	K	V	Q
Template Known Secondary structure											T	T															S	S													T																				G	G	G															S	S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	R	R	C	I	W	T	S	L	N	K	A	D	D	V	I	C	L	H	Q	L	Q	P	T	A	A	V	A	G	L	P	R	D	L	A	R	Q	F	I	A	R	H	E	P	F	T	R	E	W	Y	A	G	S	A	G	Y	L	S	L	Q	Q	S	E	F	C	V	S	L	R	S	A	K	I	S	G	N	V	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	R	R	R	I	C	A	Q	L	S	R	A	S	D	T	D	C	L	Q	R	L	Q	P	T	A	A	V	A	G	L	P	R	E	A	A	R	Q	F	I	A	K	H	E	L	F	S	R	G	W	Y	A	G	S	A	G	Y	L	S	L	K	R	T	E	F	S	V	A	L	R	S	A	R	V	D	G	Q	Q	I	H
Template Known Secondary structure												S	S											S	S								S														S			T	T	T	T	S							S	S									S						T	T
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	A	G	A	G	I	V	R	G	S	D	P	E	Q	E	W	Q	E	I	D	N	K	A	A	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	A	G	A	G	I	V	A	G	S	D	A	E	Q	E	W	Q	E	I	L	Q	S	L	L	E	H
Template Known Secondary structure										T	T												G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.