Job Description P32099 Confidence 16.34% Date Thu Jan 5 11:49:06 GMT 2012 Rank 72 Aligned Residues 103 % Identity 16% Template c3izcs_ PDB info PDB header:ribosome Chain: S: PDB Molecule:60s ribosomal protein rpl20 (l18ae); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome Resolution NULL Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	A	L	G	V	S	A	E	A	S	G	R	N	D	L	V	V	K	T	V	E	G	D	R	K	V	S	G	S	A	Y	R	E	T	K	D	R	G	F	H	H	G	T	L	L	L	N	A	D	L	S	R	L	A	N	Y	L	N	P	D	K	K	K	L	A	A	K	G	I	T	S	V	R	S	R	V	T	N	L
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	Q	A	L	G	V	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	A	R	G	T	I	E	I	V	S	D	V	K	V	V	D	A	G	N	K	V	G	Q	S	E	A	S	L	L	N	L	L	N	I	S	P	F	T	F	G	L	T	V	V	Q	V	Y	D	N	G	Q	V	F	P
Template Known Secondary structure					T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T													T	T	S	B													T							S									T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.																		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	L	L	P	G	I	T	H	E	Q	V	C	E	A	I	T	E	A	F	F	A	H	Y	G	E	R	V	E	A	E	I	I	S	P	N	K	T	P	D	L
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		S	S	I	L	.	D	I	T	D	E	E	L	V	S	H	F	V	S	A	V	S	T	I	A	S	I	S	L	A	I	G	Y	P	T	L	P	S	V	G	H	T
Template Known Secondary structure						.	S																									T			S	T	T	T
Template Predicted Secondary structure						.
Template SS confidence
		199	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions