Job Description P32099 Confidence 100.00% Date Thu Jan 5 11:49:06 GMT 2012 Rank 3 Aligned Residues 311 % Identity 33% Template c2e5aA_ PDB info PDB header:ligase Chain: A: PDB Molecule:lipoyltransferase 1; PDBTitle: crystal structure of bovine lipoyltransferase in complex2 with lipoyl-amp Resolution 2.10 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		R	L	L	I	S	D	S	Y	D	P	W	F	N	L	A	V	E	E	C	I	F	R	Q	M	P	A	T	.	Q	R	V	L	F	L	W	R	N	A	D	T	V	V	I	G	R	A	Q	N	P	W	K	E	C	N	T	R	R	M	E	E	D	N	V	R	L	A	R	R	S	S	G	G	G	A	V	F	H	D	L	G
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		L	I	L	Q	S	I	S	N	D	V	Y	H	N	L	A	V	E	D	W	I	H	D	H	M	N	L	E	G	K	P	V	L	F	L	W	R	N	S	P	T	V	V	I	G	R	H	Q	N	P	W	Q	E	C	N	L	N	L	M	R	E	E	G	V	K	L	A	R	R	R	S	G	G	G	T	V	Y	H	D	M	G
Template Known Secondary structure							S																					T	T										S	S						T	T							S							T	T	T							S	S		S							T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																															.	.																						.
Query SS confidence																															.	.																						.
Query Sequence		N	T	C	F	T	F	M	A	G	K	P	E	Y	D	K	T	I	S	T	S	I	V	L	N	A	L	N	A	L	.	.	G	V	S	A	E	A	S	G	R	N	D	L	V	V	K	T	V	E	G	D	R	.	K	V	S	G	S	A	Y	R	E	T	K	D	R	G	F	H	H	G	T	L	L	L	N	A	D	L	S
Query Conservation																															.	.																						.
Alig confidence																															.	.																.	.	.	.			.
Template Conservation																																																.	.	.	.
Template Sequence		N	I	N	L	T	F	F	T	T	K	K	K	Y	D	R	M	E	N	L	K	L	V	V	R	A	L	K	A	V	H	P	H	L	D	V	Q	A	T	K	R	F	D	L	L	L	D	.	.	.	.	G	Q	F	K	I	S	G	T	A	S	K	I	G	R	N	A	A	Y	H	H	C	T	L	L	C	G	T	D	G	T
Template Known Secondary structure											G	G	G																		S	T	T							T	T	S					T	.	.	.	.	T	T												S	S										S	S
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	N	Y	L	N	P	D	K	K	K	L	A	A	K	G	I	T	S	V	R	S	R	V	T	N	L	T	E	L	L	P	G	I	T	H	E	Q	V	C	E	A	I	T	E	A	F	F	A	H	Y	G	E	R	V	E	A	E	I	I	S	P	N	K	T	P	D	L	P	N	F	A	E	T	F	A	R	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	S	S	L	L	K	S	P	Y	Q	G	I	R	S	N	A	T	A	S	T	P	A	L	V	K	N	L	M	E	K	D	P	T	L	T	C	E	V	V	I	N	A	V	A	T	E	Y	A	T	S	H	Q	I	D	N	H	I	H	L	I	N	P	T	D	E	T	V	F	P	G	I	N	S	K	A	I	E	L	Q
Template Known Secondary structure							T	S					S					S								B								T	T																			T										T	T		T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																								.	.																							.	.
Query SS confidence																								.	.																							.	.
Query Sequence		S	W	E	W	N	F	G	Q	A	P	A	F	S	H	L	L	D	E	R	F	T	W	.	.	G	G	V	E	L	H	F	D	V	E	K	G	H	I	T	R	A	Q	V	F	T	D	.	.	S	L	N	P	A	P	L	E	A	L	A	G	R	L	Q	G	C	L	Y	R	A	D	M	L	Q	Q	E	C	E	A	L	L
Query Conservation																								.	.																							.	.
Alig confidence																								.	.																							.	.																						.	.
Template Conservation																																																																							.	.
Template Sequence		T	W	E	W	I	Y	G	K	T	P	K	F	S	V	D	T	S	F	T	V	L	H	S	H	V	E	I	K	V	F	I	D	V	K	N	G	R	I	E	V	C	N	I	E	A	P	D	H	W	L	P	L	E	I	C	D	Q	L	N	S	S	L	I	G	S	K	F	S	P	.	.	I	E	T	T	V	D	E	L	H
Template Known Secondary structure		S					T	T	T																											T	T											T	T	T	S													T	T	S	B	S		S	.	.	S	T	T	T
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.
		317	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	F	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	W	N	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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