Job Description P32099 Confidence 100.00% Date Thu Jan 5 11:49:06 GMT 2012 Rank 2 Aligned Residues 325 % Identity 31% Template c1vqzA_ PDB info PDB header:ligase Chain: A: PDB Molecule:lipoate-protein ligase, putative; PDBTitle: crystal structure of a putative lipoate-protein ligase a (sp_1160)2 from streptococcus pneumoniae tigr4 at 1.99 a resolution Resolution 1.99 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	L	I	S	D	S	Y	D	P	W	F	N	L	A	V	E	E	C	I	F	R	Q	M	P	A	T	Q	R	V	L	F	L	W	R	N	A	D	T	V	V	I	G	R	A	Q	N	P	W	K	E	C	N	T	R	R	M	E	E	D	N	V	R	L	A	R	R	S	S	G	G	G	A	V	F	H	D	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	K	Y	I	I	N	H	S	N	D	T	A	F	N	I	A	L	E	E	Y	A	F	K	H	L	L	D	E	D	Q	I	F	L	L	W	I	N	K	P	S	I	I	V	G	R	H	Q	N	T	I	E	E	I	N	R	D	Y	V	R	E	N	G	I	E	V	V	R	R	I	S	G	G	G	A	V	Y	H	D	L	N
Template Known Secondary structure																											T	T		S									S	S						T	T			G	G	G	T	B									T							S	S		S							T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		84	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		N	T	C	F	T	F	M	A	G	K	P	E	.	.	.	Y	D	K	T	I	S	T	S	I	V	L	N	A	L	N	A	L	G	V	S	A	E	A	S	G	R	N	D	L	V	V	K	T	V	E	G	D	R	K	V	S	G	S	A	Y	R	E	T	K	D	R	G	F	H	H	G	T	L	L	L	N	A	D	L	S
Query Conservation														.	.	.
Alig confidence														.	.	.																																	.	.	.	.
Template Conservation																																																	.	.	.	.
Template Sequence		N	L	N	Y	T	I	I	S	K	E	D	E	N	K	A	F	D	F	K	S	F	S	T	P	V	I	N	T	L	A	Q	L	G	V	K	A	E	F	T	G	R	N	D	L	E	I	D	.	.	.	.	G	K	K	F	C	G	N	A	Q	A	Y	I	N	G	R	I	X	H	H	G	C	L	L	F	D	V	D	L	S
Template Known Secondary structure													T	T				S															T	T							T	T	T					T	.	.	.	.	T												T	T										S	S			T	T
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		R	L	A	N	Y	L	N	P	D	K	K	K	L	A	A	K	G	I	T	S	V	R	S	R	V	T	N	L	T	E	L	L	P	.	G	I	T	H	E	Q	V	C	E	A	I	T	E	A	F	F	A	H	Y	G	E	R	V	E	A	E	I	I	S	P	N	K	T	P	D	L	P	N	F	A	E	T	F	A	R	Q
Query Conservation																																			.
Alig confidence																																			.																					.																					.	.
Template Conservation																																																								.																					.	.
Template Sequence		V	L	A	N	A	L	K	V	S	K	D	K	F	E	S	K	G	V	K	S	V	R	A	R	V	T	N	I	I	N	E	L	P	K	K	I	T	V	E	K	F	R	D	L	L	L	E	Y	X	K	K	E	Y	P	.	E	X	T	E	Y	V	F	S	E	E	E	L	A	E	I	N	R	I	K	D	.	.	T	K	F
Template Known Secondary structure							B				S	S						S								B			G	G	G	T		S	S																				T	.	T																				.	.		T	T
Template Predicted Secondary structure																																																								.																					.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	W	E	W	N	F	G	Q	A	P	A	F	S	H	L	L	D	E	R	F	T	W	G	G	V	E	L	H	F	D	V	E	K	G	H	I	T	R	A	Q	V	F	T	D	S	L	N	P	A	P	L	E	A	L	A	G	R	L	Q	G	C	L	Y	R	A	D	M	L	Q	Q	E	C	E	A	L	L	V	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	W	D	W	N	Y	G	K	S	P	E	F	N	V	R	R	G	I	K	F	T	S	G	K	V	E	V	F	A	N	V	T	E	S	K	I	Q	D	I	K	I	Y	G	D	F	F	G	I	E	D	V	A	A	V	E	D	V	L	R	G	V	K	Y	E	R	E	D	V	L	K	A	L	K	T	I	D	I	T	R
Template Known Secondary structure		T						T							S								T	T											T	T										S				S	S		T								T	T		B	S	S									T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	Q	E	K	E	L	R	E	L	S	A	W	M	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	F	A	G	I	S	R	E	E	I	A	E	A	V	V	G
Template Known Secondary structure		T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions