Job Description P32670 Confidence 40.19% Date Thu Jan 5 11:49:59 GMT 2012 Rank 163 Aligned Residues 220 % Identity 15% Template d1vjia_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420								.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.			.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.																		.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.																		.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	E	A	Q	A	A	F	G	N	G	A	E	G	V	G	L	F	R	T	E	M	L	Y	M	D	R	T	S	A	P	.	.	.	.	.	.	.	G	E	S	E	L	Y	N	I	F	C	Q	A	L	E	S	A	N	.	.	G	R	S	I	I	V	R	T	M	D	I	G	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																.	.	.	.	.	.	.																		.	.													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.																		.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	H	A	A	I	Y	Y	S	Q	R	T	T	P	G	G	F	L	I	T	E	A	T	G	V	S	D	T	A	Q	G	Y	Q	D	T	P	G	I	W	T	K	E	H	V	E	A	W	K	P	I	V	D	A	V	H	A	K	G	G	I	F	F	C	Q	I	W	H	V	G	R	V	S	N	S	G	F	Q	P	N	G	K
Template Known Secondary structure											T			T	T						S				S	S	T	T				S	T	T			B		S	S																	T	T											T	T	S	S		G	G	G	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
							450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.		.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.														.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																													.																										.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Query SS confidence		.	.	.	.	.																													.																										.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Query Sequence		.	.	.	.	.	G	D	K	P	V	D	Y	L	N	I	P	A	E	A	N	P	F	L	G	Y	R	A	V	R	I	Y	E	E	.	Y	A	S	L	F	T	T	Q	L	R	S	I	L	R	A	S	A	H	G	S	L	K	I	M	I	.	.	.	.	.	.	.	.	.	.	.	.	.	P	M	I	S	S	M	.	.
Query Conservation		.	.	.	.	.																													.																										.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Alig confidence		.	.	.	.	.																													.																										.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation
Template Sequence		A	P	I	S	C	S	D	K	P	L	M	P	Q	I	R	S	N	G	I	D	E	A	L	F	T	P	P	R	R	L	G	I	E	E	I	P	G	I	V	N	D	F	R	L	A	A	R	N	A	M	E	A	G	F	D	G	V	E	I	H	G	A	N	G	Y	L	I	D	Q	F	M	K	D	T	V	N	D	R	T	D
Template Known Secondary structure						S	S				S		T	T		B		S	S	S	S	S	B	S	S								G	G	G	S																		T		S								T	T	S								T	T	T					S
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
									509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530						.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.		.	.	560	.	.	.			.	.	.	.	.	.	570	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																							.	.	.	.	.																												.							.	.
Query SS confidence		.	.	.	.	.	.	.																							.	.	.	.	.																												.							.	.
Query Sequence		.	.	.	.	.	.	.	E	E	I	L	W	V	K	E	K	L	A	E	A	K	Q	Q	L	R	N	E	H	I	.	.	.	.	.	P	F	D	E	K	I	Q	L	G	I	M	L	E	V	P	S	V	M	F	I	I	D	Q	C	C	E	E	.	I	D	F	F	S	I	.	.	G	S	N	D	L	T	Q	Y	L	L
Query Conservation		.	.	.	.	.	.	.																							.	.	.	.	.																												.							.	.
Alig confidence		.	.	.	.	.	.	.																							.	.	.	.	.																												.							.	.									.	.
Template Conservation																																																																																.	.
Template Sequence		E	Y	G	G	S	L	Q	N	R	C	K	F	P	L	E	I	V	D	A	V	A	K	E	I	G	P	D	R	V	G	I	R	L	S	P	F	A	D	Y	M	E	S	G	D	T	N	P	G	A	L	G	L	Y	M	A	E	S	L	N	K	Y	G	I	L	Y	C	H	V	I	E	A	R	M	H	T	L	M	P	.	.
Template Known Secondary structure		T	T	S	S	S																					G	G	G							T	T			T	T	T				S	S												T	T	T	T	T		S															.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.		.	.	.	.	.	.	.	.	640	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		A	V	D	R	D	N	A	K	V	T	R	H	Y	N	S	L	N	P	A	F	L	R	A	L	D	Y	A	V	Q	A	V	H	R	Q	G	K	W	I	G	L	C	G	E	L	G	A	K	G	S	V	L	P	L	L	V	G	L	G	.	L	D	E	L	S	M	S	A	P	S	I	P
Query Conservation																																																												.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	R	K	A	F	K	G	T	F	I	S	A	G	G	F	.	.	T	R	E	D	G	N	E	A	V	S	K	G	R	T	D	L	V	A	Y	G	R	W	F	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S						S	S		.	.											T	T	S		S					S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
																															292	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions