Return to main results Retrieve Phyre Job Id

Job DescriptionP32670
Confidence53.55%DateThu Jan 5 11:49:59 GMT 2012
Rank142Aligned Residues91
% Identity15%Templatec3h5dD_
PDB info PDB header:lyaseChain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from drug-resistant streptococcus2 pneumoniae
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   328.330.........340.........350.........360.........370.........380.........390 .........400.
Predicted Secondary structure 





















......


Query SS confidence 






























































. . . . . .










Query Sequence  QTIYIDGNAGAIVVEPGEAVARYYQQEARVQDALREQQRVWLTQQARTADGIRIEIAANIAHS. . . . . . VEAQAAFGNGA
Query Conservation    




  
 
   
       
                    
  
 

  
 
 


   ...... 
   
   

Alig confidence 































...................











......










Template Conservation   

   




   

 


  
         ...................    

 

   
    
  
  
   
 
Template Sequence  DGILLAGTTAESPTLTHDEELELFAAVQKVVN. . . . . . . . . . . . . . . . . . . GRVPLIAGVGTNDTRDSIEFVKEVAEFGG
Template Known Secondary structure 
SSTTTTGGGS
SS...................SSS



SS

Template Predicted Secondary structure 









...................









Template SS confidence 















































































   43......50.........60.........70.... .....80.........90.........100...
 
   402.......410.........420.........430.........440...
Predicted Secondary structure 













Query SS confidence 









































Query Sequence  EGVGLFRTEMLYMDRTSAPGESELYNIFCQALESANGRSIIV
Query Conservation 




 






     
 



   
  
     
 



Alig confidence 












.....

















.




Template Conservation      

  
    .....     
  
   

    . 

 
Template Sequence  FAAGLAIVPYYNK. . . . . PSQEGMYQHFKAIADASD. LPIII
Template Known Secondary structure 
S


SS
.....

S
S.S
Template Predicted Secondary structure 








.....



.

Template SS confidence 









































   104.....110...... ...120.........130.... .....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions