Job Description P32670 Confidence 66.42% Date Thu Jan 5 11:49:59 GMT 2012 Rank 113 Aligned Residues 97 % Identity 25% Template c2zrvC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:isopentenyl-diphosphate delta-isomerase; PDBTitle: crystal structure of sulfolobus shibatae isopentenyl2 diphosphate isomerase in complex with reduced fmn. Resolution 2.30 Å

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		264	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.																		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure									.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	Q	P	A	I	C	.	.	M	A	D	E	L	T	P	S	Q	F	L	E	L	D	K	N	H	L	K	G	L	L	L	K	S	G	G	T	T	S	H	T	V	I	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	N	I	P	T	L	V	G	V	D	I	D	A	L	T	P
Query Conservation									.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																																															.
Template Sequence		L	S	V	P	I	I	V	K	E	S	G	N	G	I	S	M	E	T	A	K	L	L	Y	S	Y	G	I	K	N	F	D	T	S	G	Q	G	G	T	N	W	I	A	I	E	M	I	R	D	I	R	R	G	N	W	K	A	E	S	A	K	N	F	L	D	W	G	V	P	T	A	A	S	I	M	E	V	R	.	Y	S
Template Known Secondary structure			S	S							S	S	S													T	T									B	T	S	B													T	T		T								T	T	T		S		B										.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	Q	Q	T	I	Y	I	D	G	N	A	G	A	I	V	V	E	P	G	E	A	V	A	R	Y	Y	Q	Q	E	A	R	V	Q	D	A	L	R	E	Q	Q	R	V	W	L	T	Q	Q	A	R	T	A	D	G	I	R	I	E	I	A	A	N	I	A	H	S	V	E	A	Q	A	A	F	G	N	G	A	E	G	V
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	D	S	F	L	V	G	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	R	S	G	L	D	A	A	K	A	I	A	L	G	A	D	I	A
Template Known Secondary structure		S	T	T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S											T		S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.																																																				.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		405	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	F	R	T	E	M	L	Y
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		G	M	A	L	P	.	V	L	K
Template Known Secondary structure							.
Template Predicted Secondary structure							.
Template SS confidence
		294	.	.	.	.		.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions