Job Description P32670 Confidence 52.05% Date Thu Jan 5 11:49:59 GMT 2012 Rank 144 Aligned Residues 69 % Identity 17% Template c2zkrf_ PDB info PDB header:ribosomal protein/rna Chain: F: PDB Molecule:rna expansion segment es7 part iii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	I	C	M	A	D	E	L	T	P	S	Q	F	L	E	L	D	K	N	H	L	K	G	L	L	L	K	S	G	G	T	T	S	H	T	V	I	L	A	R	S	F	N	I	P	T	L	V	G	V	D	I	D	A	L	T	P	W	Q	Q	Q	T	I	Y	I	D	G	N	A	G	A	I	V	V	E	P	G	E	A
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template Sequence		Q	L	V	V	I	A	H	D	V	D	P	I	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	F	L	P	A	L	C	R	K	M	G	V	P	Y	C	I	I	K	G	K	A	R	L	G	H	L	V	H	R	K	T	.	.	.	.	C	T	T	V	A	F	T	Q	V	N	S	E
Template Known Secondary structure		S						S			S	S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T										T							S										T	S	S		.	.	.	.		S					T	T		S	S	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.																			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.	210
		347	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	R	Y	Y	Q	Q	E	A	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	G	A	L	A	K	L	V	E	A
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions