Job Description P32670 Confidence 86.54% Date Thu Jan 5 11:49:59 GMT 2012 Rank 79 Aligned Residues 88 % Identity 17% Template c2v9dB_ PDB info PDB header:lyase Chain: B: PDB Molecule:yage; PDBTitle: crystal structure of yage, a prophage protein belonging to2 the dihydrodipicolinic acid synthase family from e. coli3 k12 Resolution 2.15 Å

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		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390							.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.
Query Sequence		I	Y	I	D	G	N	A	G	A	I	V	V	E	P	G	E	A	V	A	R	Y	Y	Q	Q	E	A	R	V	Q	D	A	L	R	E	Q	Q	R	V	W	L	T	Q	Q	A	R	T	A	D	G	I	R	I	E	I	A	A	N	I	A	H	S	.	.	.	.	.	.	V	E	A	Q	A	A	F	G	N	G	A	E	G
Query Conservation																																																															.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.												.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Sequence		L	F	F	L	G	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	V	D	R	.	R	V	P	V	L	I	G	T	G	G	T	N	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G
Template Known Secondary structure					S	S	T	T	T	T	G	G	G	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	.	S	S								S	S																T		S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.																			.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	L	F	R	T	E	M	L	Y	M	D	R	T	S	A	P	G	E	S	E	L	Y	N	I	F	C	Q	A	L	E	S	A	N	G	R	S	I	I	V
Query Conservation
Alig confidence			.	.	.	.	.	.																											.
Template Conservation			.	.	.	.	.	.																											.
Template Sequence		I	.	.	.	.	.	.	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	.	T	L	P	V	X	L
Template Known Secondary structure			.	.	.	.	.	.						S	S	S																			.	S	S
Template Predicted Secondary structure			.	.	.	.	.	.																											.
Template SS confidence
		112							.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions