Job Description P32670 Confidence 98.84% Date Thu Jan 5 11:49:59 GMT 2012 Rank 55 Aligned Residues 201 % Identity 13% Template c1u5vA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cite; PDBTitle: structure of cite complexed with triphosphate group of atp2 form mycobacterium tuberculosis Resolution 1.85 Å

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		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		I	A	A	N	I	A	H	S	V	E	A	Q	A	A	F	G	N	G	A	E	G	V	G	L	F	R	T	E	M	L	Y	M	D	R	T	S	A	P	G	E	S	E	L	Y	N	I	F	C	Q	A	L	E	S	A	N	.	G	R	S	I	I	V	R	T	M	D	I	G	G	D	K	P	V	D	Y	L	N	I	P	A
Query Conservation																																																									.
Alig confidence																.								.	.	.	.	.	.	.	.																										.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.								.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	C	P	A	D	A	P	E	A	F	A	A	A	.	A	A	A	A	D	V	V	.	.	.	.	.	.	.	.	I	L	D	L	E	D	G	V	A	A	A	Q	K	P	A	A	R	N	A	L	R	D	T	P	L	D	P	E	R	T	V	V	R	I	N	A	G	G	T	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T		G	G	G					.					S			.	.	.	.	.	.	.	.				S	S	T	T	S		G	G	G											S				G	G	G								T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.								.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.									.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	N	P	F	L	G	Y	R	A	V	R	I	Y	E	E	Y	A	S	L	F	T	T	Q	L	R	S	I	L	R	A	S	A	H	G	S	L	K	I	M	I	P	M	I	S	S	M	E	E	I	L	W	V	K	E	K	L	A	E	A	K	Q	Q	L	R	N	E	H	I	P	F	D	E	K	I	Q	L	G	I	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	Q	A	R	D	L	E	A	L	A	G	T	A	Y	T	T	V	M	L	P	K	A	E	S	A	A	Q	V	I	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	R	D	V	I	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	S								T	T									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																				.	.	.	.	.	.	.	110
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.			.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.			.	.	.	.
Predicted Secondary structure																		.	.																																																							.	.					.	.
Query SS confidence																		.	.																																																							.	.					.	.
Query Sequence		L	E	V	P	S	V	M	F	I	I	D	Q	C	C	E	E	.	.	I	D	F	F	S	I	G	S	N	D	L	T	Q	Y	L	L	A	V	D	R	D	N	A	K	V	T	R	H	Y	N	S	L	N	P	A	F	L	R	A	L	D	Y	A	V	Q	A	V	H	R	Q	G	K	W	I	.	.	G	L	C	G	.	.
Query Conservation																		.	.																																																							.	.					.	.
Alig confidence																		.	.														.											.	.	.	.																											.	.					.	.
Template Conservation																																	.											.	.	.	.
Template Sequence		V	E	T	A	R	G	A	V	C	A	A	E	I	A	A	A	D	P	T	V	G	M	M	W	G	A	E	D	L	I	A	.	T	L	G	G	S	S	S	R	R	A	.	.	.	.	D	G	A	Y	R	D	V	A	R	H	V	R	S	T	I	L	L	A	A	S	A	F	G	R	L	A	L	D	A	V	H	L	D	I
Template Known Secondary structure				S						T							S	T	T														.			T		S		S	B		T	.	.	.	.	T	S		B																		T	T									S		T
Template Predicted Secondary structure																																	.											.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
			616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.		.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																			.
Query SS confidence		.																			.
Query Sequence		.	E	L	G	A	K	G	S	V	L	P	L	L	V	G	L	G	L	D	.	E	L	S	M	S	A	P	S	I	P	A	A	K	A	R
Query Conservation		.																			.
Alig confidence		.																			.
Template Conservation
Template Sequence		L	D	V	E	G	L	Q	E	E	A	R	D	A	A	A	V	G	F	D	V	T	V	C	I	H	P	S	Q	I	P	V	V	R	K	A
Template Known Secondary structure		T																T		S					S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions