Return to main results Retrieve Phyre Job Id

Job DescriptionP32670
Confidence99.17%DateThu Jan 5 11:49:59 GMT 2012
Rank46Aligned Residues210
% Identity14%Templatec1sgjB_
PDB info PDB header:lyaseChain: B: PDB Molecule:citrate lyase, beta subunit; PDBTitle: crystal structure of citrate lyase beta subunit
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   379380.........390.........400.........410.........420........ .430.........440.........450.
Predicted Secondary structure 















.......











Query SS confidence 

















































. . . . . . .






















Query Sequence  IRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEMLYMDRTSAPGESELYNI. . . . . . . FCQALESANGRSIIVRTMDIGGD
Query Conservation    
 
 


    
   
   






 






     
 



   .......
  
     
 











Alig confidence 

























......

















.......






















Template Conservation   

 
 


       

   


 
......





 
       
  
                    



     
Template Sequence  LRSVLFAPGNRADLIAKLPRSAPDAV. . . . . . VIDLEDAVPGTAEAKAAARPVAHDAARDLIAAAPHLAVFVRVNALHSP
Template Known Secondary structure 
STT
GGGG

S......SSTTS
SSSTTS


TTST
Template Predicted Secondary structure 









......

















Template SS confidence 















































































   8.10.........20.........30... ......40.........50.........60.........70.........80.
 
   452.......460.........470.........480.........490.........500.........510.........520.........530.
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  KPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQLRSILRASAHGSLKIMIPMISSMEEILWVKEKLAEAKQQLRNEHIP
Query Conservation 
   

    
 




 



  
  
 

  








  
 
 

 


    
    
  
 
   

   
  
Alig confidence 




.................................






























...........
Template Conservation      
.................................
  
     

 



     
      
  ...........
Template Sequence  YFEDD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LSVLTPELSGVVVPKLEMGAEARQVAQMLQE. . . . . . . . . . .
Template Known Secondary structure  T.................................GGG

TTSS
S


...........
Template Predicted Secondary structure  .................................








...........
Template SS confidence 















































































   82.... ...90.........100.........110.......
 
   532.......540.........550....... ..560.........570.........580.........590.........600.........
Predicted Secondary structure 





..















Query SS confidence 

























. .



















































Query Sequence  FDEKIQLGIMLEVPSVMFIIDQCCEE. . IDFFSIGSNDLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQAVHRQGK
Query Conservation        










  

 

  ..













 

 

 
  

 


  







  

  
   
 
Alig confidence 

























..











..........





























Template Conservation        
   


  
   
  
     
  
  
  

 ..........  

         
   
  
  

 
 
 
Template Sequence  RSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDYT. . . . . . . . . . TDLGGKRTPGGLEVLYARSQVALAARLTGV
Template Known Secondary structure  TT




STTSTT
..........T



SS
GGGT
Template Predicted Secondary structure 















..........











Template SS confidence 















































































   118.120.........130.........140.........150....... ..160.........170.........180.......
 
   610. ........620... ......630... ......640........
Predicted Secondary structure  ..





...



.
Query SS confidence 

. .











. . .









.














Query Sequence  WI. . GLCGELGAKGSV. . . LPLLVGLGLD. ELSMSAPSIPAAKAR
Query Conservation   
.. 



 
 

  ...  






 . 




  
  

  
Alig confidence 

..











...









.














Template Conservation    

       
   
          

 

  


 

  

  
Template Sequence  AALDIVVTALNDPETFRADAEQGRALGYSGKLCIHPAQVALAHEY
Template Known Secondary structure 





S
TT

SS
Template Predicted Secondary structure 















Template SS confidence 












































   188.190.........200.........210.........220.........230..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions