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Job DescriptionP32670
Confidence100.00%DateThu Jan 5 11:49:59 GMT 2012
Rank3Aligned Residues381
% Identity26%Templatec1h6zA_
PDB info PDB header:transferaseChain: A: PDB Molecule:pyruvate phosphate dikinase; PDBTitle: 3.0 a resolution crystal structure of glycosomal pyruvate2 phosphate dikinase from trypanosoma brucei
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290.........300.........310.........320... ......330..
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Query Sequence  KLTQPAICMADELTPSQFLELDKNHLKGLLLKSGGTTSHTVILARSFNIPTLVGVDIDALT. . . . . . . . . . PWQQQTIYI
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Template Sequence  GRGKKVIMVRLETSPEDLAGMDAA. . CGILTARGGMTSHAAVVARGMGKCCVSGCGDMVIRGKSFKLNGSVFREGDYITI
Template Known Secondary structure  TTS

SS

GGG
TTTTTS..SSS

TT
TT



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SSS
TTSS
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   446...450.........460......... 470.........480.........490.........500.........510.........520...
 
   333......340.........350.........360.........370.........380.........390.........400.........410..
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Query Sequence  DGNAGAIVVEPGEAVARYYQQEARVQDALREQQRVWLTQQARTADGIRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEML
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Template Sequence  DGSKGLIYAGKLKLRSPDLKGSFQTI. . . . . . . . . . . . . LQWCQEMKRLGVRTNADTPADAAKARSFGAEGVGLCRTEHM
Template Known Secondary structure  TTSS








S
STT.............

S
SSTTT

S
B
SGG
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   524.....530.........540......... 550.........560.........570.........580.........590
 
   413......420.... .....430.........440.........450.........
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Query Sequence  YMDRTSAPGESE. . . . . . . . . . . . . . . . . . . . LYNIFCQALESANGRSIIVRTMDIGGDKPVDYLNI. . . . . . . . . . . . .
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Template Sequence  FFEGSRINFIREMILADSASGRKAALDKLLPIQRADFVGILRAMRGLPVTIRLLDPPLHEFVPHDAAAQFELAQKLGMPA
Template Known Secondary structure  GSTTTS
SSTTTSSS



S
GGGG

SS
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   591........600.........610.........620.........630.........640.........650.........660.........670
 
   460.........470.........480.........490..... ....500.........510.........520...
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Query Sequence  . . . . . . . . . PAEANPFLGYRAVRIYEEYASLFTTQLRSILRASAH. . . . . . . GSLKIMIPMISSMEEILWVKEKLAEAKQ
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Template Sequence  EKVRNRVNALHELNPMLGHRGCRLGITYPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAE
Template Known Secondary structure  SS

SSSTTSS
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   671........680.........690.........700.........710.........720.........730.........740.........750
 
   524.....530.........540.........550.........560.........570.........580. ........ 590
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Query Sequence  QLRNEHIPFDEKIQLGIMLEVPSVMFIIDQCCEEIDFFSIGSNDLTQYLLAVDRDNAK. VTRHYNSL. . . . . . . . . . . . N
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Template Sequence  AVITKS. GKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQ
Template Known Secondary structure  S.
S




STTTT
S
TTT

GGG
TTTTTT
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TTTS

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   751..... ...760.........770.........780.........790.........800.........810.........820.........
 
   591........600........ .610.........620.........630.........640.........650.........
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Query Sequence  PAFLRALDYAVQAVHRQG. . KWIGLCGELGAKGSVLPLLVGLGLDELSMSAPSIPAAKARMAQLDSRECRK
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Template Sequence  EGIGELVRIAVTKGRRVKPMLKMGICGEHGGDPATIGFCHKVGLDYVSCSPFRVPVAIVAAAHASIKDRRA
Template Known Secondary structure  TTSTT

SGGGG
T
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   830.........840.........850.........860.........870.........880.........890.........900
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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