|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | A | R | Y | I | A | I | D | W | G | S | T | N | L | R | A | W | L | Y | Q | G | . |
D | H | C | L | E | S | R | Q | S | E | A | G | V | T | R | L | N | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | S | P | A | A | V | L | A | E | V | T | T | D | W | R | E | E | K | T | P | V | V | M | A | G | M | V | G |
Query Conservation |   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   | . |   |   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|
|
|
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   | . |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |   |   |
Template Sequence |   |
L | K | . |
Y | I | I | G | X | D | V | G | T | T | A | T | K | G | V | L | Y | D | I | N | G | K | A | V | A | S | V | S | K | G | Y | P | L | I | Q | T | K | V | G | Q | A | E | E | D | P | K | L | I | F | D | A | V | Q | E | I | I | F | D | L | T | Q | K | I | D | G | K | I | A | A | I | S | W | S | S | Q | X | H |
Template Known Secondary structure |   |
|  | . |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |
|
|
| B |
| S | S | T | T |
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |  |  |  |  |  |  |  |  |  |
| S | S |
Template Predicted Secondary structure |   |
|  | . |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | |
. | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | N | V | G | W | K | V | A | P | Y | L | S | V | P | A |
Query Conservation |   |
|   |   |
|
|   |
|
|
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |
|   |
|
|   |   |   |
Template Sequence |   |
S | L | I | G | L | G | S | D | D | E | L | L | T | N | S |
Template Known Secondary structure |   |
| B |  |  |  |
| T | T | S |
| B | S | S |
|  |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |