|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | A | R | Y | I | A | I | D | W | G | S | T | N | L | R | A | W | L | Y | Q | G | . |
D | H | C | L | E | S | R | Q | S | E | A | G | V | T | R | L | N | G | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | P | A | A | V | L | A | E | V | T | T | D | W | R | E | E | K | T | P | V | V | M | A | G | M | V | G |
Query Conservation |   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   | . |   |   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |
Template Sequence |   |
M | E | K | F | V | L | S | L | D | E | G | T | T | S | A | R | A | I | I | F | D | R | E | S | N | I | H | G | I | G | Q | Y | E | F | P | Q | H | Y | P | R | P | G | W | V | E | H | N | P | E | E | I | W | D | A | Q | L | R | A | I | K | D | A | I | Q | S | A | R | I | E | P | N | Q | I | A | A | I | G | V | T | N |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |
|
|
| B |
|
| S | T | T |
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| G | G | G |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
69 | 70 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
S | N | V | G | W | K |
Query Conservation |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
Template Sequence |   |
Q | R | E | T | T | L |
Template Known Secondary structure |   |
| S | S |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . |
  |