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5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
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. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
Y | I | A | I | D | W | G | S | T | N | L | R | A | W | L | Y | Q | G | D | H | . |
C | L | E | S | R | Q | S | E | A | G | V | T | R | L | N | G | K | . |
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S | P | A | A | V | L | A | E | V | T | T | D | W | R | . |
E | E | K | T | P | V | V | M | A | G | M | V | G | S | N | V |
Query Conservation |   |
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|   |   |   |   |   | . |
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|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |
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|   |   |   |   |   |   |   |   | . |   |   |   |   |
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Alig confidence |   |
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Template Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
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Template Sequence |   |
Y | I | G | I | D | L | G | T | S | G | V | K | V | I | L | L | N | E | Q | G | E | V | V | A | A | Q | T | E | K | L | T | V | S | R | P | H | P | L | W | S | E | Q | D | P | E | Q | W | W | Q | A | T | D | R | A | M | K | A | L | G | D | Q | H | S | L | Q | D | V | K | A | L | G | I | A | G | Q | M | H | G | A | T |
Template Known Secondary structure |   |
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| S | S |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |
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| B |
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| S | T | T |
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|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
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| T | T |
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|  |  |  |  |  |  |
| S | S |
| B |  |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | W | K | V | A | P | Y | L | S | V | P | A |
Query Conservation |   |
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|   |
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|   |   |
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Alig confidence |   |
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Template Conservation |   |
  |   |
|   |   |
|   |
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|   |   |   |
Template Sequence |   |
L | L | D | A | Q | Q | R | V | L | R | P | A |
Template Known Secondary structure |   |
 |  |
| T | T | S |
| B |
| S |
|  |
Template Predicted Secondary structure |   |
 |  |
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|  |  |
Template SS confidence |   |
|
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  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . |
  |