Job Description P31459 Confidence 28.80% Date Thu Jan 5 11:47:49 GMT 2012 Rank 83 Aligned Residues 267 % Identity 13% Template c2ch5D_ PDB info PDB header:transferase Chain: D: PDB Molecule:nagk protein; PDBTitle: crystal structure of human n-acetylglucosamine kinase in2 complex with n-acetylglucosamine Resolution 1.9 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60										.	.	.	.	.	.	.	.
Predicted Secondary structure																										.											.																								.				.	.	.	.	.	.	.	.	.
Query SS confidence																										.											.																								.				.	.	.	.	.	.	.	.	.
Query Sequence		M	T	A	R	Y	I	A	I	D	W	G	S	T	N	L	R	A	W	L	Y	Q	G	D	H	.	C	L	E	S	R	Q	S	E	A	G	.	V	T	R	L	N	G	K	S	P	A	A	V	L	A	E	V	T	T	D	W	R	E	E	.	K	T	P	.	.	.	.	.	.	.	.	.	V	V	M	A	G	M	V	G
Query Conservation																										.											.																								.				.	.	.	.	.	.	.	.	.
Alig confidence																										.											.																								.				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	A	I	Y	G	G	V	E	G	G	G	T	R	S	E	V	L	L	V	S	E	D	G	K	I	L	A	E	A	D	G	L	S	T	N	H	W	L	I	G	T	D	K	C	V	E	R	I	N	E	M	V	N	R	A	K	R	K	A	G	V	D	P	L	V	P	L	R	S	L	G	L	S	L	S	G	G	D	Q
Template Known Secondary structure		T	S										T	T									T	T	S																																					T			T	T			B	S							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	V	G	W	K	V	A	P	Y	L	S	V	P	A	C	F	S	S	I	G	E	Q	L	T	S	V	G	D	N	I	W	I	I	P	G	L	C	V	S	H	D	D	N	H	N	V	M	R	G	E	E	T	Q	L	I	G	A	R	A	L	A	P	S	S	L	Y	V	M	P	G	T	H	C	K	W	V	Q	A	D
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	A	G	R	I	L	I	E	.	.	.	.	.	.	.	.	.	E	L	R	D	R	F	P	Y	L	S	E	S	Y	L	I	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	A	G	S	I	A	T	A	T	P	D	G	G	V	V	L	I	S	G	T	G	S	N	C	R	L	I	N
Template Known Secondary structure											.	.	.	.	.	.	.	.	.							T	T	S	B	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S								S	S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.										90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		149	150	.	.	.	.	.										.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																				.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.																				.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	Q	I	N	D	F	.	.	.	.	.	.	.	.	.	R	T	V	M	T	G	E	L	H	H	L	L	L	N	H	S	L	I	G	.	A	G	L	P	P	Q	E	N	S	A	D	A	F	T	A	G	L	E	R	G	L	N	T	P	A	I	L	P	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation									.	.	.	.	.	.	.	.	.																				.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.																				.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	D	G	S	E	S	G	C	G	G	W	G	H	M	M	G	D	E	G	S	A	Y	W	I	A	H	Q	A	V	K	I	V	F	D	S	I	D	N	L	E	A	A	P	H	D	I	G	Y	V	K	Q	A	M	F	H	Y	F	Q	V	P	D	R	L	G	I	L	T	H	L	Y	R	D	F	D	K	C	R	F	A	G
Template Known Secondary structure		T	T	S										T	T	T			T	T	S																		T	S	S			S	S														T		S	S									T	T	T								T
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
			205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.								.	.	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.	.	.	.	.				.	.
Predicted Secondary structure		.																																										.	.	.	.	.	.	.								.	.	.	.	.															.	.	.
Query SS confidence		.																																										.	.	.	.	.	.	.								.	.	.	.	.															.	.	.
Query Sequence		.	F	E	V	R	A	S	H	V	L	G	T	L	P	R	E	Q	V	S	E	F	L	S	G	L	L	I	G	A	E	V	A	S	M	R	D	Y	V	A	H	Q	H	.	.	.	.	.	.	.	A	I	T	L	V	A	G	.	.	.	.	.	T	S	L	T	A	R	Y	Q	Q	A	F	Q	A	M	.	.	.	G	C
Query Conservation		.																																										.	.	.	.	.	.	.								.	.	.	.	.															.	.	.
Alig confidence		.																																										.	.	.	.	.	.	.								.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		F	C	R	K	I	A	E	G	A	Q	Q	G	D	P	L	S	R	Y	I	F	R	K	A	G	E	M	L	G	R	H	I	V	A	V	L	P	E	I	D	P	V	L	F	Q	G	K	I	G	L	P	I	L	C	V	G	S	V	W	K	S	W	E	L	L	K	E	G	F	L	L	A	L	T	Q	G	R	E	I	F	S
Template Known Secondary structure		T										T	T																							G	G	G	S		G	G	G	G		S	S	S								S	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	T	A	V	A	G	D	T	A	F	Q	A	G	I	R	S	I	A	H	A	V	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	F	T	L	M	K	L	R	H	S	S	A	L	G	G	A	S	L	G	A	R	H	I	G
Template Known Secondary structure									S	S		T											T	T	T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions