Job Description P31459 Confidence 35.52% Date Thu Jan 5 11:47:49 GMT 2012 Rank 69 Aligned Residues 234 % Identity 12% Template c2ap1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative regulator protein; PDBTitle: crystal structure of the putative regulatory protein Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																								.																															.	.	.	.	.
Query SS confidence																								.																															.	.	.	.	.
Query Sequence		A	R	Y	I	A	I	D	W	G	S	T	N	L	R	A	W	L	Y	Q	G	D	H	.	C	L	E	S	R	Q	S	E	A	G	V	T	R	L	N	G	K	S	P	A	A	V	L	A	E	V	T	T	D	W	.	.	.	.	.	R	E	E	K	T	P	V	V	M	A	G	M	V	G	S	N	V	G	W	K	V	A
Query Conservation																								.																															.	.	.	.	.
Alig confidence																								.									.	.																					.	.	.	.	.
Template Conservation																																	.	.
Template Sequence		A	M	Y	Y	G	F	D	I	G	G	T	K	I	A	L	G	V	F	D	S	T	R	R	L	Q	W	E	K	R	V	P	.	.	T	P	H	T	S	Y	S	A	F	L	D	A	V	C	E	L	V	E	E	A	D	Q	R	F	G	V	K	G	S	V	G	I	G	I	P	G	M	P	E	T	E	D	G	T	L	Y	A
Template Known Secondary structure											S	S									T	T											.	.				S																					T	S									S	S	B	S			T	T	S			B
Template Predicted Secondary structure																																	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	L	S	V	P	A	C	F	S	S	I	G	E	Q	L	T	S	V	G	D	N	I	W	I	I	P	G	L	C	V	S	H	D	D	N	H	N	V	M	R	G	E	E	T	Q	L	I	G	A	R	A	L	A	P	S	S	L	Y	V	M	P	G	T	H	C	K	W	V	Q	A	D	S	Q	Q	I	N	D	F	R
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.
Template Sequence		A	N	V	P	A	A	S	G	K	P	L	R	A	D	L	S	A	R	L	D	R	D	V	R	L	D	N	D	A	N	C	F	A	L	S	.	.	.	.	.	.	.	.	.	E	A	W	D	D	E	F	T	Q	Y	P	L	V	M	G	L	I	L	G	T	G	V	G	G	G	L	V	L	N	G	K	P	I	T	G	Q
Template Known Secondary structure		T	T		T	T	T	T	T	S											T	S															.	.	.	.	.	.	.	.	.			T	S	T	T	G	G	G		S								S	S	S								T	T						T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.										.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.																.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	M	T	G	E	L	H	H	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	H	S	L	I	G	A	G	L	P	P	Q	E	N	S	A	D	A	F	T	A	G	L	E	R	G	L	N	T	P	A	I	L	P	Q	L	F	E	V	R	A	S	H	V	L	G	T	L	P	R	E	Q	V
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Template Conservation																																																																			.	.	.	.
Template Sequence		S	Y	I	T	G	E	F	G	H	M	R	L	P	V	D	A	L	T	L	M	G	F	D	F	P	L	R	R	C	G	C	G	Q	M	G	C	I	E	N	Y	L	S	G	R	G	F	A	W	L	Y	Q	H	Y	Y	D	Q	S	L	Q	A	P	E	I	I	A	.	.	.	.	L	W	E	Q	G	D	E	Q	A	H	A
Template Known Secondary structure		T	S		T	T		G	G	G	S	B											T	T	S				B		T	T	S		B	S	B	T					S																								.	.	.	.				T	T
Template Predicted Secondary structure																																																																			.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	F	L	S	G	L	L	I	G	A	E	V	A	S	M	R	D	Y	V	A	H	Q	H	A	I	T	L	V	A	G
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		H	V	E	R	Y	L	D	L	L	A	V	C	L	G	N	I	L	T	I	V	D	P	D	L	.	L	V	I	G	G	G
Template Known Secondary structure																								S		.					S	G
Template Predicted Secondary structure																										.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions