Job Description P33227 Confidence 100.00% Date Thu Jan 5 11:51:26 GMT 2012 Rank 3 Aligned Residues 159 % Identity 24% Template d1ocya_ SCOP info Receptor-binding domain of short tail fibre protein gp12 Receptor-binding domain of short tail fibre protein gp12 Receptor-binding domain of short tail fibre protein gp12 Resolution 1.5

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																	.																										.	.	.	.	.	.	.	.
Query SS confidence																	.																										.	.	.	.	.	.	.	.
Query Sequence		S	A	L	P	V	G	V	P	V	P	W	P	S	A	T	.	P	P	T	G	W	L	K	C	N	G	A	A	F	S	A	E	E	Y	P	E	L	A	K	A	Y	.	.	.	.	.	.	.	.	P	T	N	K	L	P	D	L	R	G	E	F	I	R	G	W	D	D	G	R	G	I	D	T	G	R	S	I	L	S	I
Query Conservation																	.																										.	.	.	.	.	.	.	.
Alig confidence																	.																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	I	P	V	G	A	I	M	M	W	A	A	D	S	L	P	S	D	A	W	R	F	C	H	G	G	T	V	S	A	S	D	C	P	L	Y	A	S	R	I	G	T	R	Y	G	G	S	S	S	N	P	G	L	P	D	M	R	G	L	F	V	R	G	S	G	R	G	S	H	L	T	N	P	N	V	N	G	N	D
Template Known Secondary structure				S		T	T						S	S	S	S		S	S	T	T				S	B	S		B			T	T	T								T	T	T	T	T	S	B		S	S	S	B	B			B		T	T						S	S								G	G	G	S	S	B
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		78																				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	A	T	E	D	H	A	H	G	L	P	S	R	S	T	I	V	T	D	A	T	I	N	F	Y	F	D	E	I	W	V	N	S	G	T	D	I	I	K	R	G	N	T	N	D	A	G	L	P	A	P	D	Y	G	T	F	K	T	Y
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	F	G	K	P	R	L	G	V	G	C	T	G	G	Y	V	G	E	V	Q	K	Q	Q	M	S	Y	H	K	H	A	G	G	F	G	E	Y	D	D	S	G	A	F	G	N	T	R	R	S	N	F	V	G	T	R	K	G	L	D	W	D	N	R	S	Y	F	T	N	D	G	Y	E	I	D	P	A	S	Q	R	N	S
Template Known Secondary structure		T	T	S		B		T	T	T	T					S	T	T															S				S	S	S			T	T					S	S	S					S	S				S										S	S		S	S		G	G	G			G
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	S	V	D	G	L	G	A	A	A	S	E	T	R	P	R	N	I	A	F	N	Y	I	V	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Y	T	L	N	R	P	E	L	I	G	N	E	T	R	P	W	N	I	S	L	N	Y	I	I	K	V
Template Known Secondary structure		G	G			S	S	T	T		S	S	S					S
Template Predicted Secondary structure
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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