Job Description P33227 Confidence 100.00% Date Thu Jan 5 11:51:26 GMT 2012 Rank 2 Aligned Residues 160 % Identity 34% Template c2xgfA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:long tail fiber protein p37; PDBTitle: structure of the bacteriophage t4 long tail fibre needle-2 shaped receptor-binding tip Resolution 2.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	L	P	V	G	V	P	V	P	W	P	S	A	T	P	P	T	G	W	L	K	C	N	G	A	A	F	S	A	E	E	Y	P	E	L	A	K	A	Y	P	T	N	K	L	P	D	L	R	G	E	F	I	R	G	W	D	D	G	R	G	I	D	T	G	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	Y	P	I	G	A	P	I	P	W	P	S	D	S	V	P	A	G	F	A	L	M	E	G	Q	T	F	D	K	S	A	Y	P	K	L	A	V	A	Y	P	S	G	V	I	P	D	M	R	G	Q	T	I	K	G	K	P	S	G	R	A	V	L	S	A	E	A	D	G	V	K	A	H	S	H	S	A	S	A	S
Template Known Secondary structure				S		T	T	S						S	S	S			T	T					B	S		B			T	T	T									T	T	S	B			B		T	T								T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		811	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890
															74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	S	I	Q	G	Y	A	T	E	D	H	A	H	G	L	P	S	R	S	T	I	V	T	D	A	T	I	N	F	Y	F	D	E	I	W	V	N	S	G	T	D	I	I	K	R	G	N	T	N	D	A	G	L	P	A	P	D	Y	G	T	F	K	T	Y	K	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	D	L	G	T	K	T	T	S	S	F	D	Y	G	T	K	G	T	N	S	T	G	G	H	T	H	S	G	S	G	S	T	S	T	N	G	E	H	S	H	Y	I	E	A	W	N	G	T	G	V	G	G	N	K	M	S	S	Y	A	I	S	Y	R	A	G	G	S	N	T	N	A	A	G	N	H	S	H	T	F
Template Known Secondary structure																																																		T	T			S	S	S				S			S	S
Template Predicted Secondary structure
Template SS confidence
		891	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970
		141	.	.	.	.	.	.																															.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	D	G	L	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	S	E	T	R	P	R	N	I	A	F	N	Y	I	V	R	A	A
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	G	T	S	S	A	G	D	H	S	H	S	V	G	I	G	A	H	T	H	T	V	A	I	G	S	H	G	H	T	I	T	V	N	S	T	G	N	T	E	N	T	V	K	N	I	A	F	N	Y	I	V	R	L	A
Template Known Secondary structure																																							S		S	S				S
Template Predicted Secondary structure
Template SS confidence
		971	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions