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Job DescriptionP33227
Confidence100.00%DateThu Jan 5 11:51:26 GMT 2012
Rank1Aligned Residues159
% Identity25%Templatec1pdiQ_
PDB info PDB header:structural proteinChain: Q: PDB Molecule:short tail fiber protein; PDBTitle: fitting of the c-terminal part of the short tail fibers2 into the cryo-em reconstruction of t4 baseplate
Resolution12.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SALPVGVPVPWPSATPP. TGWLKCNGAAFSAEEYPELAKAYP. . . . . . . . TNKLPDLRGEFIRGWDDGRGIDT. . . . . . .
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Template Sequence  RTIPVGAIMMWAADSLPSDAWRFCHGGTVSASDCPLYASRIGTRYGGSSSNPGLPDMRGLFVRGSGRGSHLTNPNVNGND
Template Known Secondary structure  GTS
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   339340.........350.........360.........370.........380.........390.........400.........410........
 
   71........80.........90.........100.........110.........120.........130........
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Query Sequence  . . . . . . . . . . . . GRSILSIQGYATEDHAHGLPSRSTIVTDATINFYFDEIWVNSGTDIIKRGNTNDAGLPAPDYGTFKTY
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Template Sequence  QFGKPRLGVGCTGGYVGEVQIQQMSYHKHAGGFGEHDDLGAFGNTRRSNFVGTRKGLDWDNRSYFTNDGYEIDPESQRNS
Template Known Secondary structure  TTS


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   419420.........430.........440.........450.........460.........470.........480.........490........
 
   139140.........150.........160.....
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Query Sequence  KQSVDGLGAAASETRPRNIAFNYIVRA
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Template Sequence  KYTLNRPELIGNETRPWNISLNYIIKV
Template Known Secondary structure  TS

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   499500.........510.........520.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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