Job Description P68739 Confidence 8.42% Date Thu Jan 5 12:11:10 GMT 2012 Rank 60 Aligned Residues 163 % Identity 17% Template d1w9ha1 SCOP info Ribonuclease H-like motif Ribonuclease H-like PIWI domain Resolution 1.95

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	L	D	K	D	P	P	D	L	I	A	G	A	D	V	G	F	E	Q	G	G	E	V	T	R	A	A	M	V	L	L	K	Y	P	S	L	E	L	V	E	Y	K	V	A	R	I	A	T	T	M	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																.
Template Sequence		N	V	D	P	E	K	G	S	D	I	I	I	G	T	G	A	T	.	R	I	D	N	V	N	L	F	C	F	A	M	V	F	K	.	K	D	G	T	M	L	W	N	E	I	S	P	I	V	T	S	S	E	Y	L	T	Y	L	K	S	T	I	K	K	V	V	Y	G	F	K	K	S	N	P	D	W	D	V	E	K	L
Template Known Secondary structure					G	G	G	T	T										.		S	S	S	S											.	T	T	S													G	G	G																					T	T
Template Predicted Secondary structure																			.																.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
								74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.							.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure		.	.	.	.	.	.																							.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																							.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	I	P	G	F	L	S	F	R	E	Y	P	A	L	L	A	A	W	E	M	L	S	Q	.	.	.	.	.	.	K	P	D	L	V	F	V	D	G	H	G	I	S	H	P	R	R	L	G	V	A	S	H	F	G	L	L	V	D	V	P	T	I	G	V	A	K	K	R	L	C	G	K	F	E	P
Query Conservation		.	.	.	.	.	.																							.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																							.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	H	V	S	G	K	R	P	K	M	K	D	G	E	T	K	I	L	K	E	T	V	E	E	L	K	K	Q	E	M	V	S	R	D	V	K	Y	A	I	L	H	L	N	E	T	H	P	F	W	V	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S																						T	T	S	S		T	T																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180														.	.	.	.	.	.	.	.	.	190	.	.	.								.	.	.	.	.	.	200	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Query Sequence		L	S	S	E	P	G	A	L	A	P	L	M	D	K	G	E	Q	L	A	W	V	W	R	S	K	A	R	C	N	P	L	F	I	A	T	G	H	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	D	S	A	L	A	W	V	Q	R	C	M	.	.	.	.	.	.	.	K	G	Y	R	L	P	E	P
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Alig confidence		.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation		.														.	.	.	.
Template Sequence		.	H	P	Y	E	G	T	K	V	K	L	S	S	K	.	.	.	.	R	Y	L	L	T	L	L	Q	P	Y	L	V	T	P	I	K	P	L	S	V	E	I	V	S	D	N	W	T	S	E	E	Y	Y	H	N	V	H	E	I	L	D	E	I	Y	Y	L	S	K	M	N	W	R	G	F	R	S	R	N	L	P	V	T
Template Known Secondary structure		.			S	S	S					S	S	S	S	.	.	.	.							B		T	T																			T	T	T																T	T			T	T	S	S	S				S
Template Predicted Secondary structure		.														.	.	.	.
Template SS confidence
			309	310	.	.	.	.	.	.	.	.	.	320	.					.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	W	A	D	A	V	A	S	E	R	P	A	F	V	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	Y	P	K	L	V	A	G	I	I	A	N	V	N	R	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions