Job Description P68739 Confidence 85.82% Date Thu Jan 5 12:11:10 GMT 2012 Rank 10 Aligned Residues 194 % Identity 14% Template d1u04a2 SCOP info Ribonuclease H-like motif Ribonuclease H-like PIWI domain Resolution 2.25

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	D	P	P	D	L	I	A	G	A	D	V	G	F	E	Q	G	G	E	V	T	R	A	A	M	V	L	L	K	Y	P	S	L	E	L	V	E	Y	K	V	A	R	I	A	T	T	M	P	Y	I	P	G	F	L	S	F	R	E	Y	P	A	L	L	A	A	W	E	M	L	S	Q	K	P	D	L	V	F	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R	F	N	Y	D	Y	I	I	G	I	D	V	A	P	X	K	R	S	E	G	Y	I	G	G	S	A	V	X	F	D	S	Q	G	Y	I	R	K	I	V	P	I	K	I	G	E	Q	R	G	E	S	V	D	X	N	E	F	F	K	E	X	V	D	K	F	K	E	F	N	I	K	L	D	N	K	K	I	L	L	L
Template Known Secondary structure					S	S	S													T	T	T											T	T	S														S	S	S	S																	T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																							.	.											.	.	.																																											.	.
Query SS confidence																							.	.											.	.	.																																											.	.
Query Sequence		G	H	G	I	S	H	P	R	R	L	G	V	A	S	H	F	G	L	L	V	D	.	.	V	P	T	I	G	V	A	K	K	R	.	.	.	L	C	G	K	F	E	P	L	S	S	E	P	G	A	L	A	P	L	M	D	K	G	E	Q	L	A	W	V	W	R	S	K	A	R	C	N	P	L	F	I	A	T	.	.
Query Conservation																							.	.											.	.	.																																											.	.
Alig confidence																							.	.											.	.	.																								.	.	.	.																.	.
Template Conservation																																																													.	.	.	.
Template Sequence		R	D	G	R	I	T	N	N	E	E	E	G	L	K	Y	I	S	E	X	F	D	I	E	V	V	T	X	D	V	I	K	N	H	P	V	R	A	F	A	N	X	K	X	Y	F	N	L	G	G	A	I	Y	L	I	P	H	K	L	K	.	.	.	.	Q	A	K	G	T	P	I	P	I	K	L	A	K	K	R	I	I
Template Known Secondary structure			S	B																		T										S							S	S		S							T	T							S			S	.	.	.	.	S	S		S
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		627	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.					.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.
								177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.								.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure		.	.	.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	G	H	R	V	S	V	D	S	A	L	A	W	V	Q	R	C	M	K	G	Y	.	.	.	.	.	.	.	R	L	P	E	P	T	R	W	A	D	A	V	A	S	E	R	P	A	F	V	R	Y	T	A	N
Query Conservation		.	.	.	.	.	.																					.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	G	K	V	E	K	Q	S	I	T	R	Q	D	V	L	D	I	F	I	L	T	R	L	N	Y	G	S	I	S	A	D	X	R	L	P	A	P	V	H	Y	A	H	K	F	A	N	A	I	R	N	E	W	K	I	K	E	E
Template Known Secondary structure			T	T																				T			T	T		S	S					S																T	T
Template Predicted Secondary structure
Template SS confidence
		703	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions