Return to main results Retrieve Phyre Job Id

Job DescriptionP68739
Confidence19.84%DateThu Jan 5 12:11:10 GMT 2012
Rank40Aligned Residues31
% Identity26%Templatec3iz6A_
PDB info PDB header:ribosomeChain: A: PDB Molecule:40s ribosomal protein sa (s2p); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
Resolution5.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110.........120.........130
Predicted Secondary structure 














Query SS confidence 



































Query Sequence  QKPDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGV
Query Conservation    







 
  


  


 



 
  




Alig confidence 






.....























Template Conservation    




.....
 

  
  

 

  
 





Template Sequence  SEPRLLI. . . . . LTDPRTDHQPIKESALGNIPTIAF
Template Known Secondary structure  S

S.....S
TTTTT

Template Predicted Secondary structure 



.....








Template SS confidence 



































   121...... ..130.........140.........150.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions