Job Description P68739 Confidence 100.00% Date Thu Jan 5 12:11:10 GMT 2012 Rank 1 Aligned Residues 216 % Identity 35% Template c3gocB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:endonuclease v; PDBTitle: crystal structure of the endonuclease v (sav1684) from streptomyces2 avermitilis. northeast structural genomics consortium target svr196 Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	L	A	S	L	R	A	Q	Q	I	E	L	A	S	S	V	I	R	E	D	R	L	D	K	D	P	P	D	L	I	A	G	A	D	V	G	F	E	Q	G	G	E	V	T	R	A	A	M	V	L	L	K	Y	P	S	L	E	L	V	E	Y	K	V	A	R	I	A	T	T	M	P	Y	I	P	G	F	L	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	E	E	E	A	R	A	V	Q	D	E	L	R	G	R	V	I	L	D	E	P	G	P	P	P	G	T	G	R	V	T	G	V	D	V	A	Y	D	D	E	R	D	V	V	V	A	A	A	V	V	L	D	A	A	T	L	D	V	V	A	E	A	T	A	V	G	E	V	S	F	P	Y	V	P	G	L	L	A	F
Template Known Secondary structure			S												G	G	G				S				S		T	T	S	S											S	S	S	S											T	T	T															S				T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	Y	P	A	L	L	A	A	W	E	M	L	S	Q	K	P	D	L	V	F	V	D	G	H	G	I	S	H	P	R	R	L	G	V	A	S	H	F	G	L	L	V	D	V	P	T	I	G	V	A	K	K	R	L	C	G	K	F	E	P	L	S	S	E	P	G	A	L	A	P	L	M	D	K	G	E	Q	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	I	P	T	V	L	A	A	L	D	A	L	P	C	P	P	G	L	I	V	C	D	G	Y	G	V	A	H	P	R	R	F	G	L	A	S	H	L	G	V	L	T	G	L	P	T	I	G	V	A	K	N	P	F	T	F	S	Y	E	D	P	G	A	P	R	G	S	A	A	P	L	L	A	G	A	D	E	V	G
Template Known Secondary structure		G	T										T		S	S			S	S				S	S		S	S		S	T	T	S																				S	S		T	T								S	S	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	W	R	S	K	A	R	C	N	P	L	F	I	A	T	G	H	R	V	S	V	D	S	A	L	A	W	V	Q	R	C	M	K	G	Y	R	L	P	E	P	T	R	W	A	D	A	V	A	S	E	R	P	A	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	L	R	T	Q	S	G	V	K	P	V	F	V	S	V	G	H	R	V	D	L	D	H	A	C	A	H	T	L	A	L	T	P	K	Y	R	I	P	E	T	T	R	R	A	D	S	L	C	R	R	A	L	K	E	A
Template Known Secondary structure						S	S	T	T	S										S													T		S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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