Job Description P68739 Confidence 29.22% Date Thu Jan 5 12:11:10 GMT 2012 Rank 32 Aligned Residues 76 % Identity 16% Template c3c6aA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:terminase large subunit; PDBTitle: crystal structure of the rb49 gp17 nuclease domain Resolution 1.16 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	D	P	P	D	L	I	A	G	A	D	V	G	F	E	Q	G	G	E	V	T	R	A	A	M	V	L	L	K	Y	P	S	L	E	L	V	E	Y	K	V	A	R	I	A	T	T	M	P	Y	I	P	G	F	L	S	F	R	E	Y	P	A	L	L	A	A	W	E	M	L	S	Q	K	P	D	L	V	F	V	D
Query Conservation
Alig confidence																.	.																																				.	.	.	.	.	.	.	.																.
Template Conservation																.	.																																				.	.	.	.	.	.	.	.																.
Template Sequence		P	K	E	G	R	K	Y	V	A	T	L	D	C	S	.	.	E	G	R	G	Q	D	Y	H	A	L	Q	I	I	D	I	T	E	F	P	Y	K	Q	V	A	V	Y	H	S	N	T	T	S	H	F	I	.	.	.	.	.	.	.	.	L	P	D	I	V	F	K	Y	L	M	M	Y	N	E	C	.	P	V	Y	I	E
Template Known Secondary structure				T	T											.	.		S	S	S	S											S	S	S	S										S				T	T	T	.	.	.	.	.	.	.	.												T	T	S		.					B
Template Predicted Secondary structure																.	.																																				.	.	.	.	.	.	.	.																.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400			.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.									.	.	.	.	440	.	.	.	.	.	.	.	.	.	450		.	.	.	.	.
		104	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	G	I	S	H	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	S	T	G	V	S
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		456	.	.	.	460	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions