Job Description P68739 Confidence 60.72% Date Thu Jan 5 12:11:10 GMT 2012 Rank 14 Aligned Residues 44 % Identity 27% Template c2zkqb_ PDB info PDB header:ribosomal protein/rna Chain: B: PDB Molecule:rna expansion segment es3; PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	P	G	F	L	S	F	R	E	Y	P	A	L	L	A	A	W	E	M	L	S	Q	K	P	D	L	V	F	V	D	G	H	G	I	S	H	P	R	R	L	G	V	A	S	H	F	G	L	L	V	D	V	P	T	I	G	V
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Sequence		F	T	P	G	F	T	N	Q	.	.	.	.	.	.	.	.	.	I	Q	A	A	F	R	E	P	R	L	L	V	.	.	.	.	.	V	T	D	P	R	A	D	H	Q	P	L	T	E	A	S	Y	V	N	L	P	T	I	A	L
Template Known Secondary structure									T	.	.	.	.	.	.	.	.	.	T		S	S					S				.	.	.	.	.		S		T	T	T	T											T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.										110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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