Job Description P0AD30 Confidence 4.43% Date Thu Jan 5 11:19:49 GMT 2012 Rank 30 Aligned Residues 226 % Identity 14% Template c3orgB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:cmclc; PDBTitle: crystal structure of a eukaryotic clc transporter Resolution 3.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		F	M	V	S	P	L	L	L	G	V	L	F	F	V	A	M	L	A	G	F	I	D	S	I	A	G	.	G	G	G	L	L	T	I	P	A	L	M	A	A	G	M	S	P	A	N	A	L	A	T	N	K	L	Q	A	C	G	G	S	I	S	A	T	I	Y	F	I	R	R	K	V	V	S	L	S	D	Q	K	L	N
Query Conservation																												.
Alig confidence																												.																																			.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.
Template Sequence		L	C	T	D	R	A	L	R	L	Q	T	L	A	A	A	C	A	V	G	L	A	S	S	F	G	A	P	L	G	G	V	L	Y	S	I	E	T	I	A	S	F	Y	L	V	Q	A	F	W	K	G	V	L	S	A	L	S	G	A	I	V	Y	.	.	.	.	.	.	.	E	L	D	V	S	R	T	Q	T	L	L	Y
Template Known Secondary structure					S																					T													T		S	S			T	T																T	.	.	.	.	.	.	.	T						S		T
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.								.	.	.	.	.	.	300	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.												.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	M	T	F	V	G	S	M	S	G	A	L	L	V	Q	Y	.	.	.	.	.	.	.	.	.	.	.	V	Q	A	D	V	L	R	Q	I	L	P	I	L	V	I	C	I	G	L	Y	F	L	L	M	P	K	L	G	E	E	D	R	Q	R	R	M	Y	G	L	P	F	A	L	I	A	G	G	C	V	G	F	Y
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	L	G	A	L	M	G	V	L	G	A	L	F	I	R	C	V	R	S	I	Y	E	L	R	M	R	H	Y	P	G	T	N	R	Y	F	L	V	G	V	V	A	L	F	A	S	A	L	Q	Y	P	F	P	R	A	T	I	N	D	L	F	K	A	V	T	E	L	I	L	M	P	I	I	K	F	I	L	V	A	L
Template Known Secondary structure																												S	S	S	T	T			T															T	T	T											S					S	S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.																		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	F	F	G	P	A	A	G	S	F	Y	A	L	A	F	V	T	L	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	N	L	A	K	A	T	A	H	A	K	L	L	N	A	T	S	N	I	G	G	L	L	L	F	I	L	G	G	K	V	I	W	A	T	G	F	V	M	L	V	G
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	G	L	P	L	P	A	G	V	F	V	P	S	F	L	I	G	A	G	F	G	R	L	Y	G	E	L	M	R	V	V	F	G	N	A	I	V	P	G	S	Y	A	V	V	G	A	A	A	F	T	A	G	V	T	R	A	L	S	C	A	V	I	I	F	E	V	T	G	Q	I	R	H	L	V	P	V	L	I	S
Template Known Secondary structure			T	T	S	S	S	B		B																										T	T	S																					T	T									T				S		S
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	L	G	A	R	M	G	S	R	L	V	L	S	K	G	Q	K	L	I	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	L	A	V	I	V	G	N	A	F	N	R	S	L	Y	E	T	L	V	L	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions