Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD30
Confidence4.01%DateThu Jan 5 11:19:49 GMT 2012
Rank37Aligned Residues46
% Identity15%Templatec2ksfA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sensor protein kdpd; PDBTitle: backbone structure of the membrane domain of e. coli2 histidine kinase receptor kdpd, center for structures of3 membrane proteins (csmp) target 4312c
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120...
Predicted Secondary structure 



Query SS confidence 













































Query Sequence  VSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLY
Query Conservation 
              
   
      
    
    
  

     
Alig confidence 













































Template Conservation     
 
  
      

 
   
          







  
  
Template Sequence  VQIQGSVVAAALSAVITLIAMQWLMAFDAANLVMLYLLGVVVVALF
Template Known Secondary structure 

SSSSTTSS

SS
Template Predicted Secondary structure 




Template SS confidence 













































   397..400.........410.........420.........430.........440..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions