 |
Job Description | P04816 | Confidence | 26.76% | Date | Wed Jan 25 15:20:10 GMT 2012 |
Rank | 177 | Aligned Residues | 77 |
% Identity | 8% | Template | d2djia1 |
SCOP info | DHS-like NAD/FAD-binding domain
| DHS-like NAD/FAD-binding domain
| Pyruvate oxidase and decarboxylase, middle domain
|
Resolution | 1.60 |
|
 |
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | P | K | Q | A | V | A | V | A | N | K | I | V | N | . |
D | G | I | K | Y | V | I | G | H | L | C | S | S | S | T | Q | P | A | S | D | I | Y | E | D | E | G | I | L | M | I | S | P | G | A | T | N | P | E | L | T | Q | R | G | Y | Q | H | I | M | R | T | A | G | L | D | S | S | Q | G | P | T | A | A | K |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |
|   |   | . |   |   |   |   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
A | A | Q | D | I | D | A | A | V | E | L | L | N | N | S | K | R | P | V | I | Y | A | G | I | G | T | M | G | H | G | P | A | V | Q | E | L | A | R | K | I | K | A | P | V | I | T | T | G | K | N | F | E | T | F | E | W | D | F | E | A | L | T | G | S | T | Y | R | V | G | W | K | P | A | N | E | T | I | L |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |  |  |  |  |  |
| G | G | G | T | T |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
| T | T |
| G | G | G | S |
| T | T |
| T | T | B |
|
|
| S | S | S | S | S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|