Job Description P04816 Confidence 25.47% Date Wed Jan 25 15:20:10 GMT 2012 Rank 182 Aligned Residues 139 % Identity 12% Template c3s81A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative aspartate racemase; PDBTitle: crystal structure of putative aspartate racemase from salmonella2 typhimurium Resolution 1.80 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	A	C	D	P	K	Q	A	V	A	V	A	N	K	I	V	N	D	G	I	K	Y	V	I	G	H	L	C	S	S	S	T	Q	P	A	S	D	I	Y	E	D	E	G	I	L	M	I	S	P	G	A	T	N	P	E	L	T	Q	R	G	Y	Q	H	I	M	R	T	A	G	L	D	S	S	Q	G	P	T	A	A
Query Conservation
Alig confidence																																		.
Template Conservation																																		.
Template Sequence		G	G	P	S	P	Y	R	Y	L	E	R	Y	L	H	M	L	E	D	A	G	A	E	C	I	V	I	P	C	N	T	A	H	.	Y	W	F	D	D	L	Q	N	V	A	K	A	R	M	I	S	I	L	D	A	T	L	G	D	I	P	P	S	A	R	H	V	G	L	L	A	T	N	A	T	L	A	T	G	L	Y	Q
Template Known Secondary structure						S														T	T		S					S		S	G	G	G	.	G	G									S	S												T	S		T	T															T	T	T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	I	L	E	T	V	K	P	Q	R	I	A	I	I	H	D	K	Q	Q	Y	G	E	G	L	A	R	S	V	Q	D	G	L	K	A	A	N	A	N	V	V	F	F	D	G	I	T	A	G	E	K	D	F	S	A	L	I	A	R	L	K	K	E	N	I	D	F	V	Y	Y	G	G	Y
Query Conservation
Alig confidence									.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Sequence		K	K	A	L	A	R	G	.	.	.	.	L	T	L	I	Q	P	E	D	A	G	Q	A	L	V	M	Q	A	I	Y	T	L	K	R	G	D	.	.	.	.	.	.	.	.	.	K	T	A	A	Q	A	L	L	L	P	Q	I	D	S	L	I	A	R	G	A	Q	A	I	I	M	G	C	T
Template Known Secondary structure								T	.	.	.	.																							T	T		.	.	.	.	.	.	.	.	.																		T	T		S						S	T
Template Predicted Secondary structure									.	.	.	.																										.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions