Job Description P04816 Confidence 66.31% Date Wed Jan 25 15:20:10 GMT 2012 Rank 117 Aligned Residues 137 % Identity 14% Template c3ojcD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:putative aspartate/glutamate racemase; PDBTitle: crystal structure of a putative asp/glu racemase from yersinia pestis Resolution 1.75 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		K	Q	A	V	A	V	A	N	K	I	V	N	D	G	I	K	Y	V	I	G	H	L	C	S	S	S	T	Q	P	A	S	D	I	Y	E	D	E	G	I	L	M	I	.	S	P	G	A	T	N	P	E	L	T	Q	R	G	Y	Q	H	I	M	R	T	A	G	L	D	S	S	Q	G	P	T	A	A	K	Y	I	L	E
Query Conservation																																												.
Alig confidence																													.															.
Template Conservation																													.
Template Sequence		Q	L	L	S	N	A	A	I	S	L	K	H	A	G	A	E	V	I	V	V	C	T	N	T	X	H	K	.	V	A	D	D	I	E	A	A	C	G	L	P	L	L	H	I	A	D	A	T	A	V	Q	I	K	Q	Q	G	I	D	K	I	G	L	L	G	T	R	Y	T	X	E	Q	G	F	Y	R	G	R	L	T	E
Template Known Secondary structure															T							S	S	S	G	G	G	G	.	G									T	S		B														T	T								S							S	T	T	T
Template Predicted Secondary structure																													.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	K	P	Q	R	I	A	I	I	H	D	K	Q	Q	Y	G	E	G	L	A	R	S	V	Q	D	G	L	K	A	A	N	A	N	V	V	F	F	D	G	I	T	A	G	E	K	D	F	S	A	L	I	A	R	L	K	K	E	N	I	D	F	V	Y	Y	G	G	Y	Y
Query Conservation
Alig confidence							.	.	.																										.	.	.	.	.	.	.
Template Conservation							.	.	.																										.	.	.	.	.	.	.
Template Sequence		K	H	G	I	E	.	.	.	V	I	T	P	D	D	T	D	R	E	A	V	N	R	I	I	Y	E	E	L	C	L	G	I	I	.	.	.	.	.	.	.	S	E	T	S	R	D	A	Y	R	R	V	I	K	K	L	E	A	Q	G	V	Q	G	I	I	F	G	C	T	E
Template Known Secondary structure							.	.	.																			T	G	G	G	T			.	.	.	.	.	.	.																		T	T		S						S	T
Template Predicted Secondary structure							.	.	.																										.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.								.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions